Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000054_09531778_09544007 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 9531510 ~ 9544510 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000054_09531778_09544007.mRNA | True | 1299 | mRNA | 0.47 | 5 | 9531510 | 9544510 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_09495785_09497239 | IRX4B, IRX4 | coding | downstream | 33828 | 9495450 ~ 9497682 (-) |
| CI01000054_09488559_09488870 | NA | coding | downstream | 42640 | 9488276 ~ 9488870 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | downstream | 47228 | 9483147 ~ 9484282 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | downstream | 48787 | 9452109 ~ 9482723 (-) |
| CI01000054_09218869_09223868 | NA | coding | downstream | 307391 | 9218632 ~ 9224119 (-) |
| CI01000054_09650064_09651286 | MED10, MED10.S | coding | upstream | 105297 | 9649807 ~ 9651286 (-) |
| CI01000054_09686420_09705911 | NSUN2.S, NSUN2 | coding | upstream | 141537 | 9686047 ~ 9705911 (-) |
| CI01000054_09812111_09813425 | NA | coding | upstream | 267348 | 9811858 ~ 9813501 (-) |
| CI01000054_09831831_09832148 | NA | coding | upstream | 287248 | 9831758 ~ 9832148 (-) |
| CI01000054_09841097_09848347 | ATAT1 | coding | upstream | 296504 | 9841014 ~ 9848892 (-) |
| G235350 | NA | non-coding | downstream | 4243 | 9526848 ~ 9527267 (-) |
| G235308 | NA | non-coding | downstream | 89659 | 9437469 ~ 9441851 (-) |
| G235298 | NA | non-coding | downstream | 130944 | 9400361 ~ 9400566 (-) |
| G235250 | NA | non-coding | downstream | 214712 | 9316532 ~ 9316798 (-) |
| G235244 | NA | non-coding | downstream | 228806 | 9302438 ~ 9302704 (-) |
| G235368 | NA | non-coding | upstream | 12254 | 9556764 ~ 9559903 (-) |
| G235575 | NA | non-coding | upstream | 32084 | 9576594 ~ 9576876 (-) |
| G235582 | NA | non-coding | upstream | 37912 | 9582422 ~ 9664231 (-) |
| G235591 | NA | non-coding | upstream | 43549 | 9588059 ~ 9657253 (-) |
| G235641 | NA | non-coding | upstream | 126288 | 9670798 ~ 9671024 (-) |
| G235216 | NA | other | downstream | 282972 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 2359837 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2877497 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 4322270 | 5206199 ~ 5209240 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 318811 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1259361 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1326594 | 10871104 ~ 10881495 (-) |
| G236748 | NA | other | upstream | 1740684 | 11285194 ~ 11295784 (-) |
| CI01000054_11780397_11781842 | SNAPIN | other | upstream | 2234380 | 11778890 ~ 11781880 (-) |
