CI01000054_11873443_11903635 (SEPT7)


Basic Information

Item Value
gene id CI01000054_11873443_11903635
gene name SEPT7
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 11872998 ~ 11904256 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_11873443_11903635.mRNA
AGTCACTCTCTCTCACTCTCTCTCTTTCATTTTGATCTCTGTAAGGTAATGCTTTTGGTTAGGTGTCATCCAAAAATCCCTTCTAACACTGCAAAAAATTGTTTTTTTAACTTAGATTTTTTGCCTTGTTTCCAGTCCAAATATCTAAAAAAATCTTAAGAAGCATTTTCTAGACTAGTAAAAATTGTCTTGTTTAAAAAATAAGTCAAAATTAAGTGAGTTTTTGCTTAAAACAAGCAAAATAATCTTGTTTTCGGTTTGAAATAAGATTACCCCATTGGCAGATTATTTTGCTTGTTTTAAGGAAAAACTCACTTAATTTTGACTTATTTTTTCTGAAAACAAGACAATAATTTTTACTTGTCAAGAAAATGCTTCTTGATTTAAGAATTTTTAGATGTTTGGACTAGAAACAAGACAAAAAATCTAAGTAAGAAAAGCATTTTTTGCAGTGAAGGGACTGACGACATGACGGCTTTGAATTTGCATCGTAGATGGAGCTCTTGGATTAGTTGGTGAAATTCTCAGTGTTTTCCACTCGTTTTAGACGCGGCGTTAATGTCCAAGCATCTTAACCTGGCACGTCTTGATTAACCGTTTACATTTATTTCCATATGCTGGATGAAGGAATCCATCTGTCCCATAATAACCCACATCAGTGACCCAGAATGTGACCTTGAGCAACAGAAGAACCTTGAGGGGTACGTGGGATTCGCAAATCTCCCCAACCAAGTGTACAGAAAGTCTGTGAAGAGGGGCTTTGAGTTCACTCTCATGGTCGTTGGAGAATCAGGTTTGGGAAAGTCTACACTCATCAACTCCCTGTTCCTGACAGACTTATATTCACCAGAGTATCCCGGACCCTCTCACAGAATCAAGAAAACTGTTCAGAGAATTCTGGGAAGTGAGTCAGACAATCAGTATTTTAGTGATTTGTGTATTAGGAGTAGGAAGAGAAGCTTCATCACTGTTTCACACTGTTGCGTCACTCTTGTCAAACTGAAGAGCTCAAGATCTGTACGGAGGAAGTTAGAGAAGACTTTACGGGTTTGTTACTGGGTCAAGGTGTCTCGTTTGGACCGTTTTTACAGGCAGGTGGTGAACAAGGTGGAGCAGTCCAAGGTGCTGATTAAAGAAGGTGGAGTTCAACTGCTGCTCACCATTGTGGACACGCCAGGCTTTGGAGATGCCGTTGATAACAGTAACTGCTGGCAGCCTGTCACCGACCACATTGACAGCAAATTTGAGGATTACCTCAACGCGGAGTCACGTGTCAATAGACGCCAGATGCCCGATAGTCGAGTGCACTGCTGTCTGTACTTCATCGCTCCCTCTGGTCATGGCACATGTGGTTTTACTACAAGCCGAGCTACAAGTTCAGCCAAGCTGCCAAACAGCAGTGTGAATGTGATACCTCACTACTACTCTACAGAGGAGACTTTTGCTGCTGTTTTTGGACTCATGCTCGGTGTTTAGTTTGAAACATTAAACCCTCGCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGTCTTGTCAGACTGAAACCACTGGATATTGAGTTCATGAAACGGTTACATGAAAAAGTGAACATCATCCCGCTCATCGCAAAAGCAGACACACTGACTCCAGAGGAGTGCCAACAGTTCAAGAAGCAGGTAAGAGTGTGCTAATGTCAAACACTGTACCTGTAGTTTTTATGGTTTTTCTCTCCCCCAAAGTACACTTACAAAAAGGCTTCTTGCCCCAAAAACATCATAATTCATTTTTTTTTTATAATTTTCCACCCACTTTATGACTCTTAGACATAAGCTGGTTGTAAACAGACCGGCCACGTTACTGAATCCTGAATAGGTGCTGGTATCAACGCTGTACAATTATTCTAAATGCATCTATCTAGATTAAACAATAAA

Function

symbol description
sept7 septin 7

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component

KEGG:

id description
K16944 SEPT7, CDC3; septin 7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_11873443_11903635.mRNA False 1921 mRNA 0.41 8 11872998 11904256

Neighbor

gene id symbol gene type direction distance location
CI01000054_11815575_11845247 EEPD1 coding downstream 26852 11815297 ~ 11846146 (-)
CI01000054_11780397_11781842 SNAPIN coding downstream 91122 11778890 ~ 11781880 (-)
CI01000054_11758803_11774872 NA coding downstream 98126 11758297 ~ 11774872 (-)
CI01000054_11724484_11731711 SYT11A coding downstream 141287 11723995 ~ 11731711 (-)
CI01000054_11705281_11711296 RIT1 coding downstream 161702 11704581 ~ 11711296 (-)
CI01000054_11964578_11981248 NA coding upstream 60121 11964377 ~ 11981319 (-)
CI01000054_12078098_12079883 AAMDC coding upstream 173674 12077930 ~ 12079896 (-)
CI01000054_12106998_12109333 AQP11 coding upstream 201929 12106185 ~ 12109835 (-)
CI01000054_12217279_12251613 MYO7A, MYO7AA coding upstream 312291 12216547 ~ 12251613 (-)
CI01000054_12266910_12288366 CAPN5A, CAPN5 coding upstream 362560 12266816 ~ 12288366 (-)
G237079 NA non-coding downstream 83360 11782600 ~ 11789638 (-)
G237125 NA non-coding downstream 258091 11614543 ~ 11614907 (-)
G236815 NA non-coding downstream 294300 11578372 ~ 11578698 (-)
G236810 NA non-coding downstream 313361 11559391 ~ 11559637 (-)
G236808 NA non-coding downstream 327576 11545194 ~ 11545422 (-)
G237087 NA non-coding upstream 5177 11909433 ~ 11911150 (-)
G237101 NA non-coding upstream 52804 11957060 ~ 11958114 (-)
G237179 NA non-coding upstream 64653 11968909 ~ 11969500 (-)
G237181 NA non-coding upstream 67412 11971668 ~ 11971928 (-)
G237184 NA non-coding upstream 71311 11975567 ~ 11975935 (-)
G236748 NA other downstream 577214 11285194 ~ 11295784 (-)
CI01000054_10872970_10881017 SDHAF3 other downstream 991782 10871104 ~ 10881495 (-)
CI01000054_10817235_10819181 TAC1 other downstream 1053653 10816015 ~ 10819362 (-)
CI01000054_09864693_09866871 PPP1R11 other downstream 2005786 9863321 ~ 9867212 (-)

Expression


Co-expression Network