CI01000054_12106998_12109333 (AQP11)


Basic Information

Item Value
gene id CI01000054_12106998_12109333
gene name AQP11
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 12106185 ~ 12109835 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_12106998_12109333.mRNA
AGTATCTAATTTTCTCTTAGATTAAACTGCCTGCAGTGATTTGGGGAGTCTATATTTGGTAATTTCTGGTCAGATTTATTTGTCTTGCAGATAAATGTTTATTCTGGTGATCTGGCAACACCGGACGAAGTTCATTACAAATCCTACTATGGTAAAGGATTGACTCGTAAATATTTTTACGTAAAAGACGTTCTCCTGCCTGATTGGCTAAAGGACAGACGTGACCGCTAGTCAGTTGACGAAATACGAATTGCTGTTAAGATAAAGGTTGGATTATGAATATTAATAAGGTTACGTGCGTGAGCACTCCCGGAAGTGTATAAAGCAACGCTAGCATCAGCTATTTAATATTCATGAGTCATGCCTTTTGCCATAGTAGGCTGCACAGATTGAATTGCAGTAGGAGGGGTAATGGCGCGAAGGCGGAACCGCTCCAAAGTTGCCTGACTGGATTAGAGTTTTGAACGATTATTCGTAGCGAGGTAGGACGGAGCTGGCAGAGATGGCTGATCTCACCGTATCTCTGTCCTTACTGGTGGGAATTGTAGTTTTTAGTGAGGTGGCGAGAAGGACTGCTTTATATCTATTCCCAAATCGAACATGGATCATCTATGTGCTGGAGTTTATTTCCACCTTTCAGTTGTGCGCGTGCACGCACGAGTTGAAGCTGCTCGCGGAGGTGGGCAGAGTGGAGCCGCAGATCGGACTGACCCTAACGTACTTCATCTCGGTGGTCCACGGGCTTTCATTCCACGGTGCGATCTGTAACCCCACCGGCGTTCTTGAGGAGCTCTGCCGCGGGACTCTCACGCGCAGATGCGCATTGACACGGATCTCATGCCAGCTGATCGCGGCTGTGGTGGCACGGCTCGTGATGCCTCTCGTTTGGTCACTGACGCTCTCTGACATGCATGCACAGCACACACTGATGGCCTTTAAATGCACGAACAGCCCAATTAATGCCCCTCTGCTGCAGGCCACCGCGGTGGAGCTGAGCTGCGCGTTTGTGATGCACACTGCTTTATCTAATGTGGACAAAGTGGAGGAGAAATATCGGATTCATGCAATAGCTGCTGTCATCACCACCTTAGTCTATGCGGGTGTGTGCACTGACACAAAGTTCCACGGTGGACATCTCACCGGAGCTGTGTTCAACCCAGCACTGGCATTCTCCATACAGTTCCCCTGTCCTGGAAACACTTTTGCTGAGTACAGTTTTGTGTACTGGATGGGACCAATACTAGGTATGACGGGCTCTCTGCTTATTTTTGACAAAGTGATCCCAGCCATTTCAGGAAAAAGCACAATTCCAAAGCACCTGAACCCTAATGGACTCAAGAAGAAAAAGATGACATGAATTAAGACGGTTTTAGAGTACTTAGTAATTACTCATGCATAATATATAGATATACTGTGAATATACAGAATATGACACTGTTATTTTCCAGCTCATCTCAAAGTAATAATGAATCTGGAGGGACCTTAATGGTTTCATTTTTAGAAGGGTTTTACTGACATTCTTGCTTTCAAAATGTCTTAAATGTCATTTTTTAATGACAACATACATATTCAAGAAGCACAGTGACTATGTAATGACACATAGCTGCAGGTTTCCAGCAACATTCATAAAAAGCACATGACCTGTGTGCCGAAAAGCATTTGTGACAACTACAAACTGTTATCTTAACAAATGGACATTCCTGGAATAAGACACATGTGAAGTGTTCTAACAGTGCTGTGTTGGGATACTATTTTGTGTTCTGTTCTACTAGCGATGACTCTTACCTAGTAATAGGTAAATGTTATAATAGTAGCACTAGTAATCTTAAGCACAGTTTTGCAGTGCCTTTGGATTATCCTGGGTAAAATAACCTTGATAAACCAGACCAGATAGAGTGCCATGTTTACAAGCAAATGCAGAATGTGAAATATGGCATAACACAATCCTGTGTTACAAGAAATTAAACGGAGCAGCACTAAAATCTATTTATTAGTCTGTTTTTAATTAAACTTTACATAAAAACACATGGCTCAGTGGTTATTTAACCTGAGAGGTCAGGCAGGCTGTTGTGAAATAGTTTCTGATGGACCTTTGACCCTTTGTGAACTCACAGATGCGCTGAACAAAACGGATATGGCGTTTCTCACTAAGAGCTGCTAAAGCAATAAA

Function

symbol description
aqp11 Predicted to enable channel activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm. Is expressed in brain; digestive system; ovary; and retina. Orthologous to human AQP11 (aquaporin 11).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_12106998_12109333.mRNA True 2170 mRNA 0.43 3 12106185 12109835

Neighbor

gene id symbol gene type direction distance location
CI01000054_12078098_12079883 AAMDC coding downstream 26289 12077930 ~ 12079896 (-)
CI01000054_11964578_11981248 NA coding downstream 124866 11964377 ~ 11981319 (-)
CI01000054_11873443_11903635 SEPT7 coding downstream 201929 11872998 ~ 11904256 (-)
CI01000054_11815575_11845247 EEPD1 coding downstream 260039 11815297 ~ 11846146 (-)
CI01000054_11780397_11781842 SNAPIN coding downstream 324309 11778890 ~ 11781880 (-)
CI01000054_12217279_12251613 MYO7A, MYO7AA coding upstream 106712 12216547 ~ 12251613 (-)
CI01000054_12266910_12288366 CAPN5A, CAPN5 coding upstream 156981 12266816 ~ 12288366 (-)
CI01000054_12302853_12308339 DCUN1D5.L, DCUN1D5, DCNL5 coding upstream 192652 12302487 ~ 12308339 (-)
CI01000054_12309670_12316748 EIF2A coding upstream 199835 12309670 ~ 12316748 (-)
CI01000054_12821724_12830490 RAB27A coding upstream 711041 12820876 ~ 12830490 (-)
G237081 NA non-coding downstream 7195 12039761 ~ 12098990 (-)
G237221 NA non-coding downstream 34702 12066222 ~ 12071483 (-)
G237215 NA non-coding downstream 72538 12033157 ~ 12033647 (-)
G237214 NA non-coding downstream 73775 12032169 ~ 12032410 (-)
G237213 NA non-coding downstream 76503 12029316 ~ 12029682 (-)
G237097 NA non-coding upstream 1584 12111419 ~ 12144763 (-)
G237237 NA non-coding upstream 56423 12166258 ~ 12167308 (-)
G237231 NA non-coding upstream 103599 12213434 ~ 12215862 (-)
G237302 NA non-coding upstream 208735 12318570 ~ 12320593 (-)
G237303 NA non-coding upstream 248465 12358300 ~ 12360324 (-)
G236748 NA other downstream 810401 11285194 ~ 11295784 (-)
CI01000054_10872970_10881017 SDHAF3 other downstream 1224969 10871104 ~ 10881495 (-)
CI01000054_10817235_10819181 TAC1 other downstream 1286840 10816015 ~ 10819362 (-)
CI01000054_09864693_09866871 PPP1R11 other downstream 2238973 9863321 ~ 9867212 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013168 aqp11 coding NC_007129.7 CM002902.2 3157911 ~ 3166726 (-)