XLOC_009892 (nbn)


Basic Information

Item Value
gene id XLOC_009892
gene name nbn
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 23837847 ~ 23977525 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019733
CTTTTATTTCTGCCttaggacttttatttttatacgGAAGTTTATTACGTCGCATATGAAGATGTAAAAGTGGCGCGCCAGTTCGTCGGTATCTTAGGATAAGACAAGTCACTTCCATATTTCATAGTAAACACAAGTATTGAAATGTGGAAACTGCAGCCAACCGAATCTGGAGGGGAAAGTGTCATTCTGCTGGCTGGACAGGAGTATGTGGTTGGCCGTAAGAATTGTGAGATCCTGCTGACCAATGATCAGTCCATCAGCCGTGTTCATGCTGTCCTCACTGTCACTGAGCAGGCAGTCACTCTGAAGGACAGCTCTAAATATGGAACTTTTGTCAATGGTGAGAAGCTTGAGTCTGGCTCCACAAAGACCTTGCAGACGGGATACAAAATCACATTTGGAGTCTTCCAGAGCAAATTCAGTCTGGAGAAAGAGTGTATTGTGGTTTGCTCCTCGTGTGTGGATAATGAAGGGAAAGTCACCCTGTCTCAAGATATTCGCTCTGTTGGAGGACGACTTGTCAGTTCCTGGACCTCTGACTGCACACATCTAGTCATGCCCACTGTAAAAGTCAccataaagACGATCTGTGCGTTGCTGTGCTGTCGACCCATAGTAAAACCTGCGTTCTTCAGTGCGCTTAGCAAAGCTGTGCAGCAGAAACTGCCACTGCCTAAAGCTGAGAGATTTAGGCCTCAAATTGATGAGCCCAGCCTGGCTAGAGATGATGTGGATCTGAGTGCACGACCTGAGAGAAAGAGCCTCTTCAAGGGGAAAACATTCCTGTTTTTGAGCTCTAAACAgATGAAGCGTTTGAGTGTGGCAGTGAGTTGTGGTGGTGGTGTGAGTCAGCTGCTGGACGAGGGCGCTCTGCCTGTCTCACTCCTGGAGTCCAGCAGCACATGTGTGCTCGACATGATCTCAGGAAACTCACAGCCTGTGATTTCTCCAGCCTCCAAGAAGTGGTTGGATTCTGTGGGCCAAATTCTGCACAGAAAAGGTTTGCGCTTTATCACTGAATCTGAGGTTGGATTGGCTGCCATTCATGTCAGTAATCAGACATACTGCAATCCCTGCTCTTCTTTGCAATCAGAATCAGTGAAAACGAATCCAGTCTTTGCCTCAGCAACACTTTCTCAGAGCACGGCTGTGGATGAGACTGCGCTCGCGGCTCCTTCCCAGAATATCACAGCCTATGTCGtcaacactgaaatctcacaggaCCAAAGCAGGATGGTTACAAGTGGGATCAGTGCAGTTGGAGAGACCCCAGAGAAAACCAATCCCACACAGAAAGCCTCAACAACCAATAAACCCTTATCCCTTGGTCAGGAACCTTCCTCTACCCGCATCGTCCAAGAAACAGTGATGTCCTCTGAGAGCTTCAGTGTGGTTGAATCTGAACAGAAGATGAAGAAAGGGTCTGTTGTCTCAGCCAGGGGAAGAGTTGAAGGTCCTGTAAAACAGAAAGCGCCTTCCAGTGGCAACACCACATTAAAACATTCTCCCCAGAAACAGACAGCCCTCACCAGCTTCTTCCAGCCTTCCAGCAAGAAAAGGCCGCGTGAAAGCAGTGCCAGTTCTGTCCAGCCAGAGCCCAAATTCTTCAAGAAAGACATCAAAGATAATGAAGATGACATCCAGCAAAGTTTTTCTGTCAATAGATCTCACAAAACCTCATCAGAGGAGACCAGTCTAGGTCAGGCTTGTGGAACTGGTCAAAACTCTAGCAGCAAGAAAAGAAAGGAACCTGAGCAGGACACCCTATTAGGCGCAGAAGAACCAACAGCTGCTGATGATTTAGAAATGTCACTTGAAGAGCTTGAATTCTTAATGTCCGACGAGATGGATGAGCCTCCGCAGACTGCAGCTAATAAAAAACAACGTCTTGAGTCAGGACTGACTAGCAAAATCAATAGCGAACAATTATCAAATCAGCAAGAGGTCACTGAGTCTAAAGGCAGGAAAGGGGAGAAGAATCAGCAAAGCAGTTCCAGCAATATTCAGAGCATGCAGTTGGACAGAGCAGGACCAGCTGTAACAAATcaggacacacaaacacagtcaaaGAGGTCACCTCCAGATCTGGAAGCACATAGTTCTGCAAACAAGGGGccctcaaaaaacaaaacacccgagCTTGAAGAGGTCAAAAAGGAGGAAGTGTCCTTTGTTGTGaatTCAAGGCCCCAAAATGGCATTTCCCAGACCTCTGAGGCTGTTCTCAAACAGGAAATGCAGGCCTCAACCTCCAATTCCGGACCTAAGAATGACCCCGATCTGCCCAGGAAGCTACTGCAGGTTCAGTTTATGTCTCTAACAGTGAACAACTCTTCCAGATCAAGACCAGGCCCATTACAGACACACAATCCAAATGACAAGAACGTCAAAAGATTTCGCAAGAAAAATGTCCCTGGATTTGATGGGCTGCCTAAGATAATTGGAGGCTCGGATCTGGTGGCTCATAATCGCAGTAAGCACTCTGAACTAGAGGAATGGCTGAGACAGGCAGCAGAGGAGGAGAAGCTGAACGAACGAGAGGAGACTTTGGGAGACGATTTGTTCAGGTACAACCCAAAACATTGCTGTTAAATGTAATCCATTCGGACCAAATGTAATACATTGGCTCATTTTGCAACAACATCAACTAGCATTAAATTGTCTGCTAACTACTACCTGCTAAAGCTTTATTTTGACTGTCAGACTATCCTACTAATCCTCACatgaaaataaatcaatgctTTACTAGAGTAAACTGAAATGTAGTTGCAGTGATATGAACAGTCGACAGAATGTCTAAACAAGAATATTAAATGTGTAAAAGTGTAAaccaataaatacatacattcgTTTAGTATTTGAACGTGGTGTTCTATATTTTGTTTTCCgccagtgtttgtttttgtgttacaGAGGCACAAAGGCTAAAGTTCTAGATGTTGGCAAGACAGTGGCTGGTTATGCTGGCATGTACTATGAGGATCATCTAAAACCCGTTACCGACTCTTACATGGATTGGGCCAAAGACAGTACAAGTTCCCTGTGGCAAAGACTGAAAAACAGATTGCCTACTCTTGGATCAGATTCAGATGAATAAACAGAACAGATATTGAGAAATTAATTCTGTATACCGATATTttgaaatgatcaaattaaatcATTCCTCCAATGTACGTATTCCACTAAACACAGTGCACAATGTAAAGTACacaatgtatgaatgaatatgtGTTATAATACGAATAAATTTCCTTAAAAAAATTTCATGTTTCCTTTTAACTAATAAACATCTTggaaattaacaaaatgaaaattataaatCCTAAATGAAGTAAGAGAAATAGAAAAAGTCCACAGTTTGCAGATTAGACACGTTTACATCCAAAGAGGAAAGTTCACTGGGTCTGCTTCTGTCAATCAGGCATGTGGAAAGCTTTTTTACAACCTTTGGACAGCCTTTGCTTAACCCTCATTAGTTTATGTACATTAAAGTCAGGAATATTGATTCTGGAACGTTTGCAAGAAAAATGAAACGACTGTCTGAGTGCAATCAGCAAACTTTTGGAAAGTTTTGGTGATTTTGCTGTGTCCTTTTGGAATTTTATTACAAAggtttgaatacattttaattcacaaaaaaagagtaaacataaaaata
>TCONS_00019734
GGCGCGCCAGTTCGTCGGTATCTTAGGATAAGACAAGTCACTTCCATATTTCATAGTAAACACAAGTATTGAAATGTGGAAACTGCAGCCAACCGAATCTGGAGGGGAAAGTGTCATTCTGCTGGCTGGACAGGAGTATGTGGTTGGCCGTAAGAATTGTGAGATCCTGCTGACCAATGATCAGTCCATCAGCCGTGTTCATGCTGTCCTCACTGTCACTGAGCAGGCAGTCACTCTGAAGGACAGCTCTAAATATGGAACTTTTGTCAATGGTGAGAAGCTTGAGTCTGGCTCCACAAAGACCTTGCAGACGGGATACAAAATCACATTTGGAGTCTTCCAGAGCAAATTCAGTCTGGAGAAAGAGTGTATTGTGGTTTGCTCCTCGTGTGTGGATAATGAAGGGAAAGTCACCCTGTCTCAAGATATTCGCTCTGTTGGAGGACGACTTGTCAGTTCCTGGACCTCTGACTGCACACATCTAGTCATGCCCACTGTAAAAGTCAccataaagACGATCTGTGCGTTGCTGTGCTGTCGACCCATAGTAAAACCTGCGTTCTTCAGTGCGCTTAGCAAAGCTGTGCAGCAGAAACTGCCACTGCCTAAAGCTGAGAGATTTAGGCCTCAAATTGATGAGCCCAGCCTGGCTAGAGATGATGTGGATCTGAGTGCACGACCTGAGAGAAAGAGCCTCTTCAAGGGGAAAACATTCCTGTTTTTGAGCTCTAAACAgATGAAGCGTTTGAGTGTGGCAGTGAGTTGTGGTGGTGGTGTGAGTCAGCTGCTGGACGAGGGCGCTCTGCCTGTCTCACTCCTGGAGTCCAGCAGCACATGTGTGCTCGACATGATCTCAGGAAACTCACAGCCTGTGATTTCTCCAGCCTCCAAGAAGTGGTTGGATTCTGTGGGCCAAATTCTGCACAGAAAAGGTTTGCGCTTTATCACTGAATCTGAGGTTGGATTGGCTGCCATTCATGTCAGTAATCAGACATACTGCAATCCCTGCTCTTCTTTGCAATCAGAATCAGTGAAAACGAATCCAGTCTTTGCCTCAGCAACACTTTCTCAGAGCACGGCTGTGGATGAGACTGCGCTCGCGGCTCCTTCCCAGAATATCACAGCCTATGTCGtcaacactgaaatctcacaggaCCAAAGCAGGATGGTTACAAGTGGGATCAGTGCAGTTGGAGAGACCCCAGAGAAAACCAATCCCACACAGAAAGCCTCAACAACCAATAAACCCTTATCCCTTGGTCAGGAACCTTCCTCTACCCGCATCGTCCAAGAAACAGTGATGTCCTCTGAGAGCTTCAGTGTGGTTGAATCTGAACAGAAGATGAAGAAAGGGTCTGTTGTCTCAGCCAGGGGAAGAGTTGAAGGTCCTGTAAAACAGAAAGCGCCTTCCAGTGGCAACACCACATTAAAACATTCTCCCCAGAAACAGACAGCCCTCACCAGCTTCTTCCAGCCTTCCAGCAAGAAAAGGCCGCGTGAAAGCAGTGCCAGTTCTGTCCAGCCAGAGCCCAAATTCTTCAAGAAAGACATCAAAGATAATGAAGATGACATCCAGCAAAGTTTTTCTGTCAATAGATCTCACAAAACCTCATCAGAGGAGACCAGTCTAGGTCAGGCTTGTGGAACTGGTCAAAACTCTAGCAGCAAGAAAAGAAAGGAACCTGAGCAGGACACCCTATTAGGCGCAGAAGAACCAACAGCTGCTGATGATTTAGAAATGTCACTTGAAGAGCTTGAATTCTTAATGTCCGACGAGATGGATGAGCCTCCGCAGACTGCAGCTAATAAAAAACAACGTCTTGAGTCAGGACTGACTAGCAAAATCAATAGCGAACAATTATCAAATCAGCAAGAGGTCACTGAGTCTAAAGGCAGGAAAGGGGAGAAGAATCAGCAAAGCAGTTCCAGCAATATTCAGAGCATGCAGTTGGACAGAGCAGGACCAGCTGTAACAAATcaggacacacaaacacagtcaaaGAGGTCACCTCCAGATCTGGAAGCACATAGTTCTGCAAACAAGGGGccctcaaaaaacaaaacacccgagCTTGAAGAGGTCAAAAAGGAGGAAGTGTCCTTTGTTGTGaatTCAAGGCCCCAAAATGGCATTTCCCAGACCTCTGAGGCTGTTCTCAAACAGGAAATGCAGGCCTCAACCTCCAATTCCGGACCTAAGAATGACCCCGATCTGCCCAGGAAGCTACTGCAGGTTCAGTTTATGTCTCTAACAGTGAACAACTCTTCCAGATCAAGACCAGGCCCATTACAGACACACAATCCAAATGACAAGAACGTCAAAAGATTTCGCAAGAAAAATGTCCCTGGATTTGATGGGCTGCCTAAGATAATTGGAGGCTCGGATCTGGTGGCTCATAATCGCAGTAAGCACTCTGAACTAGAGGAATGGCTGAGACAGGCAGCAGAGGAGGAGAAGCTGAACGAACGAGAGGAGACTTTGGGAGACGATTTGTTCAGCAGATCCTTCATTTTCAGCACACTTGGAAAGTATGACGTCAATGATTTCCCAGCTGCTTTTAAGTCATTGTTCACAGTTGAGGTCACGCTGGGCTGCGAAGACCCGTCGATATTTCTAACAAGCTCCTGCTGTTTAAACACACAGTGA
>TCONS_00019735
CGCGCCAGTTCGTCGGTATCTTAGGATAAGACAAGTCACTTCCATATTTCATAGTAAACACAAGTATTGAAATGTGGAAACTGCAGCCAACCGAATCTGGAGGGGAAAGTGTCATTCTGCTGGCTGGACAGGAGTATGTGGTTGGCCGTAAGAATTGTGAGATCCTGCTGACCAATGATCAGTCCATCAGCCGTGTTCATGCTGTCCTCACTGTCACTGAGCAGGCAGTCACTCTGAAGGACAGCTCTAAATATGGAACTTTTGTCAATGGTGAGAAGCTTGAGTCTGGCTCCACAAAGACCTTGCAGACGGGATACAAAATCACATTTGGAGTCTTCCAGAGCAAATTCAGTCTGGAGAAAGAGTGTATTGTGGTTTGCTCCTCGTGTGTGGATAATGAAGGGAAAGTCACCCTGTCTCAAGATATTCGCTCTGTTGGAGGACGACTTGTCAGTTCCTGGACCTCTGACTGCACACATCTAGTCATGCCCACTGTAAAAGTCAccataaagATTTAGGCCTCAAATTGATGAGCCCAGCCTGGCTAGAGATGATGTGGATCTGAGTGCACGACCTGAGAGAAAGAGCCTCTTCAAGGGGAAAACATTCCTGTTTTTGAGCTCTAAACAgATGAAGCGTTTGAGT
>TCONS_00019736
GCGCCAGTTCGTCGGTATCTTAGGATAAGACAAGTCACTTCCATATTTCATAGTAAACACAAGTATTGAAATGTGGAAACTGCAGCCAACCGAATCTGGAGGGGAAAGTGTCATTCTGCTGGCTGGACAGGAGTATGTGGTTGGCCGTAAGAATTGTGAGATCCTGCTGACCAATGATCAGTCCATCAGCCGTGTTCATGCTGTCCTCACTGTCACTGAGCAGGCAGTCACTCTGAAGGACAGCTCTAAATATGGAACTTTTGTCAATGGTGAGAAGCTTGAGTCTGGCTCCACAAAGACCTTGCAGACGGGATACAAAATCACATTTGGAGTCTTCCAGAGCAAATTCAGTCTGGAGAAAGAGTGTATTGTGGTTTGCTCCTCGTGTGTGGATAATGAAGGGAAAGTCACCCTGTCTCAAGATATTCGCTCTGTTGGAGGACGACTTGTCAGTTCCTGGACCTCTGACTGCACACATCTAGTCATGCCCACTGTAAAAGTCAccataaagACGATCTGTGCGTTGCTGTGCTGTCGACCCATAGTAAAACCTGCGTTCTTCAGTGCGCTTAGCAAAGCTGTGCAGCAGAAACTGCCACTGCCTAAAGCTGAGAGATTTAGGCCTCAAATTGATGAGCCCAGCCTGGCTAGAGATGATGTGGATCTGAGTGCACGACCTGAGAGAAAGAGCCTCTTCAAGGGGAAAACATTCCTGTTTTTGAGCTCTAAACAgATGAAGCGTTTGAGTGTGGCAGTGAGTTGTGGTGGTGGTGTGAGTCAGCTGCTGGACGAGGGCGCTCTGCCTGTCTCACTCCTGGAGTCCAGCAGCACATGTGTGCTCGACATGATCTCAGGAAACTCACAGCCTGTGATTTCTCCAGCCTCCAAGAAGTGGTTGGATTCTGTGGGCCAAATTCTGCACAGAAAAGGTTTGCGCTTTATCACTGAATCTGAGGTTGGATTGGCTGCCATTCATGTCAGTAATCAGACATACTGCAATCCCTGCTCTTCTTTGCAATCAGAATCAGTGAAAACGAATCCAGTCTTTGCCTCAGCAACACTTTCTCAGAGCACGGCTGTGGATGAGACTGCGCTCGCGGCTCCTTCCCAGAATATCACAGCCTATGTCGtcaacactgaaatctcacaggaCCAAAGCAGGATGGTTACAAGTGGGATCAGTGCAGTTGGAGAGACCCCAGAGAAAACCAATCCCACACAGAAAGCCTCAACAACCAATAAACCCTTATCCCTTGGTCAGGAACCTTCCTCTACCCGCATCGTCCAAGAAACAGTGATGTCCTCTGAGAGCTTCAGTGTGGTTGAATCTGAACAGAAGATGAAGAAAGGGTCTGTTGTCTCAGCCAGGGGAAGAGTTGAAGGTCCTGTAAAACAGAAAGCGCCTTCCAGTGGCAACACCACATTAAAACATTCTCCCCAGAAACAGACAGCCCTCACCAGCTTCTTCCAGCCTTCCAGCAAGAAAAGGCCGCGTGAAAGCAGTGCCAGTTCTGTCCAGCCAGAGCCCAAATTCTTCAAGAAAGACATCAAAGATAATGAAGATGACATCCAGCAAAGTTTTTCTGTCAATAGATCTCACAAAACCTCATCAGAGGAGACCAGTCTAGGTCAGGCTTGTGGAACTGGTCAAAACTCTAGCAGCAAGAAAAGAAAGGAACCTGAGCAGGACACCCTATTAGGCGCAGAAGAACCAACAGCTGCTGATGATTTAGAAATGTCACTTGAAGAGCTTGAATTCTTAATGTCCGACGAGATGGATGAGCCTCCGCAGACTGCAGCTAATAAAAAACAACGTCTTGAGTCAGGACTGACTAGCAAAATCAATAGCGAACAATTATCAAATCAGCAAGAGGTCACTGAGTCTAAAGGCAGGAAAGGGGAGAAGAATCAGCAAAGCAGTTCCAGCAATATTCAGAGCATGCAGTTGGACAGAGCAGGACCAGCTGTAACAAATcaggacacacaaacacagtcaaaGAGGTCACCTCCAGATCTGGAAGCACATAGTTCTGCAAACAAGGGGccctcaaaaaacaaaacacccgagCTTGAAGAGGTCAAAAAGGAGGAAGTGTCCTTTGTTGTGaatTCAAGGCCCCAAAATGGCATTTCCCAGACCTCTGAGGCTGTTCTCAAACAGGAAATGCAGGCCTCAACCTCCAATTCCGGACCTAAGAATGACCCCGATCTGCCCAGGAAGCTACTGCAGGTTCAGTTTATGTCTCTAACAGTGAACAACTCTTCCAGATCAAGACCAGGCCCATTACAGACACACAATCCAAATGACAAGAACGTCAAAAGATTTCGCAAGAAAAATGTCCCTGGATTTGATGGGCTGCCTAAGATAATTGGAGGCTCGGATCTGGTGGCTCATAATCGCAGTAAGCACTCTGAACTAGAGGAATGGCTGAGACAGGCAGCAGAGGAGGAGAAGCTGAACGAACGAGAGGAGACTTTGGGAGACGATTTGTTCAGGTACAACCCTAGGCCTGCAAAGAAACGATAGATCATTAAAGTACTAATGTCTGTGTGATGCAAGACTGCAAAGAAAAACACATGTCCGTTTTTATGAGATTTATTTctctaataaaaaatactgtgtacaaaacatatgtatatatatatatatatatatattaaaagttgAAGTTTTACAAAA
>TCONS_00019757
GAAGACAGTGTCTTTACTCAGAAATGGTCAGTGATCTGTTTATTTAGGATGGGAACGCACTCAAATCCAGCATTGCTACACAAAATCCCCACACTCACGCAAACACTGAACCGGATCCCAAAAACCTCTGAAAAACAACAGTAAGTTCGACAAAGGTCTGGCTGACGTTCCTCTTCAGATTTACTCCTACACCTGCACTTCTAAAGATGTCCAGATTGGTGCTCCTTGTTCTGTTTGTGACATTGCAAGCTTGCTTGACCTTGTCCAACCCGTTGCCAACTACAGCTCCAGACAATGCAGGTCTTCTTGAAAGAGCAAAGCAGTTGTACAGAGGCACAAAGGCTAAAGTTCTAGATGTTGGCAAGACAGTGGCTGGTTATGCTGGCATGTACTATGAGGATCATCTAAAACCCGTTACCGACTCTTACATGGATTGGGCCAAAGACAGTACAAGTTCCCTGTGGCAAAGACTGAAAAACAGATTGCCTACTCTTGGATCAGATTCAGATGAATAAACAGAACAGATATTGAGAAATTAATTCTGTATACCGATATTttgaaatgatcaaattaaatcATTCCTCCAATGTACGTATTCCACTAAACACAGTGCACAATGTAAAGTACacaatgtatgaatgaatatgtGTTATAATACGAATAAATTTCCTTAAAAAAA
>TCONS_00019758
AGCATTGCTACACAAAATCCCCACACTCACGCAAACACTGAACCGGATCCCAAAAACCTCTGAAAAACAACAGTAAGTTCGACAAAGGTCTGGCTGACGTTCCTCTTCAGATTTACTCCTACACCTGCACTTCTAAAGATGTCCAGATTGGTGCTCCTTGTTCTGTTTGTGACATTGCAAGCTCCAGACAATGCAGGTCTTCTTGAAAGAGCAAAGCAGTTGTACAGAGGCACAAAGGCTAAAGTTCTAGATGTTGGCAAGACAGTGGCTGGTTATGCTGGCATGTACTATGAGGATCATCTAAAACCCGTTACCGACTCTTACATGGATTGGGCCAAAGACAGTACAAGTTCCCTGTGGCAAAGACTGAAAAACAGATTGCCTACTCTTGGATCAGATTCAGATGAATAAACAGAACAGATATTGAGAAATTAATTCTGTATACCGATATTttgaaatgatcaaattaaatcATTCCTCCAATGTACGTATTCCACTAAACACAGTGCACAATGTAAAGTACacaatgtatgaatgaatatgtGTTATAATACGAATAAATTTCCTTAAAAAAA
>TCONS_00019759
AAGTTCGACAAAGGTCTGGCTGACGTTCCTCTTCAGATTTACTCCTACACCTGCACTTCTAAAGATGTCCAGATTGGTGCTCCTTGTTCTGTTTGTGACATTGCAAGCTTGCTTGACCTTGTCCAACCCGTTGCCAACTACAGCTCCAGACAATGCAGGTCTTCTTGAAAGAGCAAAGCAGTTGTACAGtgtttgtttttgtgttacaGAGGCACAAAGGCTAAAGTTCTAGATGTTGGCAAGACAGTGGCTGGTTATGCTGGCATGTACTATGAGGATCATCTAAAACCCGTTACCGACTCTTACATGGATTGGGCCAAAGACAGTACAAGTTCCCTGTGGCAAAGACTGAAAAACAGATTGCCTACTCTTGGATCAGATTCAGATGAATAAACAGAACAGATATTGAGAAATTAATTCTGTATACCGATATTttgaaatgatcaaattaaatcATTCCTCCAATGTACGTATTCCACTAAACACAGTGCACAATGTAAAGTACacaatgtatgaatgaatatgtGTTATAATACGAATAAATTTC
>TCONS_00019760
ATGTCCAGATTGGTGCTCCTTGTTCTGTTTGTGACATTGCAAGCTTGCTTGACCTTGTCCAACCCGTTGCCAACTACAGCTCCAGACAATGCAGGTCTTCTTGAAAGAGCAAAGCAGTTGTACAGAGGCACAAAGGCTAAAGTTCTAGATGTTGGCAAGACAGTGGCTGGTTATGCTGGCATGTACTATGAGGATCATCTAAAACCCGTTACCGACTCTTACATGGATTGGGCCAAAGACAGTACAAGTTCCCTGTGGCAAAGACTGAAAAACAGATTGCCTACTCTTGGATCAGATTCAGATGAATAAACAGAACAGATATTGAGAAATTAATTCTGTATACCGATATTttgaaatgatcaaattaaatcATTCCTCCAATGTACGTATTCCACTAAACACAGTGCACAATGTAAAGTACacaatgtatgaatgaatatgtGTTATAATACGAATAAATTTCCTTAAAAAAATTTCATGTTTCCTTTTAACTAATAAACATCTTggaaattaacaaaatgaaaattataaatCCTAAATGAAGTAAGAGAAATAGAAAAAGTCCACAGTTTGCAGATTAGACACGTTTACATCCAAAGAGGAAAGTTCACTGGGTCTGCTTCTGTCAATCAGGCATGTGGAAAGCTTTTTTACAACCTTTGGACAGCCTTTGCTTAACCCTCATTAGTTTATGTACATTAAAGTCAGGAATATTGATTCTGGAACGTTTGCAAGAAAAATGAAACGACTGTCTGAGTGCAATCAGCAAACTTTTGGAAAGTTTTGGTGATTTTGCTGTGTCCTTTTGGAATTTTATTACAAAggtttgaatacattttaattcacaaaaaaagagtaaacataaaaata

Function

symbol description
nbn Predicted to enable damaged DNA binding activity. Predicted to be involved in DNA duplex unwinding; double-strand break repair via homologous recombination; and mitotic G2 DNA damage checkpoint signaling. Predicted to act upstream of or within double-strand break repair; meiotic cell cycle; and telomere maintenance. Predicted to be located in chromosome, telomeric region and nucleus. Predicted to be part of Mre11 complex. Human ortholog(s) of this gene implicated in several diseases, including Nijmegen breakage syndrome; acute lymphoblastic leukemia; aplastic anemia; breast cancer; and reproductive organ cancer (multiple). Orthologous to human NBN (nibrin).

GO:

id name namespace
GO:0006302 double-strand break repair biological_process
GO:0042770 signal transduction in response to DNA damage biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0007049 cell cycle biological_process
GO:0016233 telomere capping biological_process
GO:0007093 mitotic cell cycle checkpoint biological_process
GO:0007095 mitotic G2 DNA damage checkpoint biological_process
GO:0051321 meiotic cell cycle biological_process
GO:0000723 telomere maintenance biological_process
GO:0032508 DNA duplex unwinding biological_process
GO:0000724 double-strand break repair via homologous recombination biological_process
GO:0006281 DNA repair biological_process
GO:0000781 chromosome, telomeric region cellular_component
GO:0005634 nucleus cellular_component
GO:0030870 Mre11 complex cellular_component
GO:0005694 chromosome cellular_component
GO:0003678 DNA helicase activity molecular_function
GO:0003684 damaged DNA binding molecular_function

KEGG:

id description
ko03440 Homologous recombination
ko04218 Cellular senescence
ko03032 DNA replication proteins
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-041008-35 Predicted to enable damaged DNA binding activity. Predicted to be involved in DNA duplex unwinding; double-strand break repair via homologous recombination; and mitotic G2 DNA damage checkpoint signaling. Predicted to act upstream of or within double-strand break repair; meiotic cell cycle; and telomere maintenance. Predicted to be located in chromosome, telomeric region and nucleus. Predicted to be part of Mre11 complex. Human ortholog(s) of this gene implicated in several diseases, including Nijmegen breakage syndrome; acute lymphoblastic leukemia; aplastic anemia; breast cancer; and reproductive organ cancer (multiple). Orthologous to human NBN (nibrin).
ZDB-GENE-081022-25 Orthologous to human APOC4 (apolipoprotein C4).

Ensembl:

ensembl_id ENSDARG00000040303 ENSDARG00000075614

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019733 False 3661 mRNA 0.43 16 23837847 23977525
TCONS_00019734 False 2647 mRNA 0.47 16 23837918 23872794
TCONS_00019735 False 645 nonsense_mediated_decay 0.47 6 23837920 23854611
TCONS_00019736 False 2680 mRNA 0.46 16 23837921 23875475
TCONS_00019757 False 679 mRNA 0.40 4 23975930 23977128
TCONS_00019758 False 575 mRNA 0.39 4 23975998 23977128
TCONS_00019759 False 547 mRNA 0.40 4 23976072 23977118
TCONS_00019760 True 870 mRNA 0.36 3 23976227 23977525

Neighbor

gene id symbol gene type direction distance location
XLOC_009891 si:dkey-7f3.9 coding upstream 1925 23811554 ~ 23835922 (+)
XLOC_009890 rab13 coding upstream 28236 23796612 ~ 23809611 (+)
XLOC_009888 kcnn3 coding upstream 118198 23598908 ~ 23719649 (+)
XLOC_009889 CR533578.1 coding upstream 230495 23607231 ~ 23607352 (+)
XLOC_009887 adar coding upstream 280133 23531583 ~ 23557714 (+)
XLOC_009900 apoa2 coding downstream 1453 23978978 ~ 23980354 (+)
XLOC_009901 apoc2 coding downstream 6654 23984179 ~ 23994642 (+)
XLOC_009902 NA coding downstream 41583 24019108 ~ 24028618 (+)
XLOC_009903 NA coding downstream 220954 24198479 ~ 24207903 (+)
XLOC_009904 CT867948.1 coding downstream 538567 24516092 ~ 24524076 (+)
XLOC_009875 NA non-coding upstream 1141351 22695226 ~ 22696496 (+)
XLOC_009872 NA non-coding upstream 1258521 22575143 ~ 22579326 (+)
XLOC_009870 NA non-coding upstream 1508819 22327970 ~ 22329028 (+)
XLOC_009869 NA non-coding upstream 1510345 22323766 ~ 22327502 (+)
XLOC_009905 NA non-coding downstream 588209 24565734 ~ 24573801 (+)
XLOC_009910 NA non-coding downstream 857250 24834775 ~ 24897111 (+)

Expression


Co-expression Network