CI01000054_12524575_12697096 (UNC13C)


Basic Information

Item Value
gene id CI01000054_12524575_12697096
gene name UNC13C
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 12524575 ~ 12697096 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_12524575_12697096.mRNA
CTGCATGTGCTCAGAAAGACTCTCCAAGCGTTGATTTATCCCATCTCCTCTACGACACCCCATAATTTCGAAGTGTGGACGGCCACCGCACCCACCTACTGTCACGAGTGTGAGGGTCTGCTATGGGGCATCGCCCGGCAGGGCATGCGCTGCACCGAATGCGGAGTGAAATGCCACGAGAAATGCCAGGACCTCCTGAACGCAGACTGTCTCCAACGTGCAGTAGAGAAAAGCTCGAAACACGGAGCCGAGGACAAAACCCAAAACATCATCATGGCCATGAAGGAACGGATGAAAATCAGGGAGAAGAACAGACCCGAGGTGTTCGAGGTGATTCAGGAGATGTTTCAGCTCACAAAGGAAGACTTTATCACCCATCTGAAGACAGCCAAACAGGCCGTGCTGGAGGGGACGTCCAAGTGGTCTGCTAAAATCACCATCACAGTTTTATGTGCTCAAGGTTTGCAAGCCAAAGACAAGACGGGCTCCAGTGACCCCTACGTCACAGTACAAGTGGGAAAGACCAAACGCAGGACCAAAACGGTTTTCGGCAATCTCAACCCCGTCTGGGACGAGAAGTTCTTCTTTGAATGTCATAACGCCACAGACCGTATAAAAGTTCGTGTGTGGGATGAAGACGACGACATAAAGTCCAGAGTGAAGCAGCACTTTAAGAAGGAATCTGATGACTTTCTGGGTCAGACTATCATCGAGGTGCGGATGCTGAGCGGGGAGATGGACGTCTGGTATAATCTTGAGAAGCGGACAGATAAGTCAATGGTGTCAGGGGCCATCAGGCTGAAGATCAGCGTTGAGATGAAAGGGGAAGAGAAGGTGGCTCCGCCTCATGGGCAGTACACATGTTTACACGAGAATCTCTTCCATTACCTGACGGAGGTGAAGAACAGTGGAGTCGTGAAGATCCCAGAAGTCAAAGGCGACGATGCCTGGAAGGTTTACTTTGACGACGTATCGCAGGAGATTGTGGATGAGTTTGCCATGCGTTTTGGTGTGGAGTCCATCTACCAGGCCATGACTCATTTCTCTTGTCTCTCATCCAAGTACATGTGTCCCGGTGTTCCCGCGGTGATGAGTAACTTGCTTGCCAACATCAACGCCTACTTCGCTCACACAACAACAGCAACCACCAACATCTCGGCCTCTGACCGATTTGCAGCATCCAACTTTGGGAGAGAGAAGTTCGTTAAACTCTTGGATCAGCTTCACAACTCTCTGAGGATCGACCTCTCCAAGTATCGGGATAACTTCCCTGCTGGAAATCCAGAGAGACTCCAGGATTTAAAATCAACCGTTGACCTGCTGACGAGCATCACCTTTTTCAGGATGAAGGTGCAGGAGCTGCAGAATCCTCCCAGAGCCAGTATGGTAGTTAAAGACTGTGTGAAGGCCTGTCTGGACTCCACCTACAAATACATCTTTGACAACTGCCATGAGCTCTACAACCAGCTACTGGACCAGGCTAAGAAGCAGGATCTGCCACGTGAGGAACAGGGTCCGTCCATCAAGAACCTGGACTTTTGGCCCAAACTGATCACGTTGATGGTGTCTGTTGTAGATGAGGACAGAATGGCCTACACACCCATCATTAACCAGTTCCCGCAGGAGTTGAATATGGGTAGAATTAGTGCTGAAATCATGTGGAACCTCTTCGCCATGGATATGAAGTACGCAATGGAGGAACATGACAAGCATCGTCTATGCAAGAGCACAGAGTACATGAATTTGCACTTCAAAGTCAAATGGTTCCACAACGAGTACGTCCGAGACCTGCCTGCCTTTAAGGGGATTCCTCCAGAGTATTCCCTGTGGTTTGAGCCGTTTGTTATCCAGTGGTTGGATGAAAATGAAGATGTAGCAATGGATTTTCTTAACGGAGCTCTAGAGAGAGATAAAAAAGATGGGTTTCAGCAGACATCAGAACACGCTCTCTTCTCTTGCTCTGTGGTGGATGTGTTCACGCAGTTGAACCAAAGCTTTGAGATCATTAAGAAGCTGGAGTGTCCGAACCCTCAAGCTCTCGCTCACTTCATGCGCAGATTTGCTAAGACCATAAATAAAGTTCTTCTCCAGTATGCTGTGATCATCTCCAAAGACTTCAGCAACCATCTGAACAAGGAGAAAGTGCCCTGTATCCTCTTGAACAACATCCAGCAGCTCCGAGTTCAGCTGGAGAAGATGTTTGAGTCCATGGGAGGAAAACAGCTGGACGCTGAGGCCAGTGAGCTGCTCAAAGAACTTCAGAACAAGCTCAATACGGTCCTGGATGAGCTCAGCGGGGTCTTCGGCTCCAGTTTCAAGCCAGTGATTGAGGACTGTGTCAAACAAATGAACCAAGAGCTCATGCAGATGAAAGGAAATGCAGGGAACAAGAGTAACGCAGCCATGGACGCAGAGACTGTCCTGCGACCCCTCATGGACCTGCTGGACAAGAACCTAATTCTGTTTGCTAAGATCTGTGAGAAGACAGTTCTCAAACGGGTTCTGAAGGAGCTGTGGAAAATAGTCCTCAACACCATCGAACGACAGATTGTTCTTCCGCCACTCTCAGACCAGACAGTGAGTGTAACACATCAAGGGGCTCAGATGATTTTCAGTGCTGCCAAGGACCTGGGTCAGCTCTCCAAGCTCAAGGAGCATGTGATCCGGGAGGAAGCTCGTAGTCTGAGCCCTCGACAATGTGCCGCCATGGATTTAGTGCTTCCTACCATCAAGCAATATTTCCATGCGGGTGGAAACGGTCTGAAGAAAACCTTCCTGGAAAAGAGCCCCGAACTCAAGTCCTTGAAATACACCCTCAGCCTTTACACTCAACCCACAGATGCCTTGATCAAGAAATATATATGCACCCAAACCTCTCAAGGTCAGTCCACGTCTGGATCCATTGGGGAGGTCGCCATCCAGGTGGACCTGATCTCACACCCCGGTACTGGAGAGCACAAAGTCAGCGTCAAAGTTGTGGGTGTGAACAACATCAACTGGCAGACCAATGCCATGTTTCGCCCCTTCGTGGAGATCAATGCCATCGGCCCACACTTGGCTGACAAGAAACGCAAGTTTAGCACCAAAACCAAGAATAACAACTGGTCTCCAAAATACAATGAAACATTCCAGTACGTGCTGAGTAACGAACATGGCCCAGAGGCCTACGAGCTTCACATCTCCGTGAAGGACTACTGCTTTGCCCGAGAGGACCGAATCATCGGTATGACGGTCCTGCAGCTCAGAGAACTGGCCGAAAAGGGCAGCCTGAACGCCTGTTATCCACTCGCCAGGAGCGTAACGATGGATGAAACCGGTCTGACCATCATGAGAATACTCTCGCAAAGGACCAACGACGAAGTGGCCAAAGAGTTTGTACGTCTCAAATCAGACACGCGGTCAGCTGAGGAAGTATCG

Function

symbol description
unc13c Orthologous to human UNC13C (unc-13 homolog C).

GO: NA

KEGG:

id description
K15293 UNC13A_B_C, MUNC13; protein unc-13 A/B/C

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_12524575_12697096.mRNA True 3417 mRNA 0.50 26 12524575 12697096

Neighbor

gene id symbol gene type direction distance location
CI01000054_12321079_12339203 LRCH3 coding upstream 185372 12321079 ~ 12339203 (+)
CI01000054_12318711_12319755 SERP2, SERP1, SERP1.S coding upstream 204605 12318312 ~ 12320602 (+)
CI01000054_12296634_12299462 NA coding upstream 225027 12296634 ~ 12299548 (+)
CI01000054_12191048_12211237 GDPD4A, GDPD4 coding upstream 313338 12189522 ~ 12211237 (+)
CI01000054_12142398_12166344 PAK1 coding upstream 357576 12142398 ~ 12166999 (+)
CI01000054_12811634_12819065 NA coding downstream 114538 12811634 ~ 12819280 (+)
CI01000054_12846104_12850954 NA coding downstream 148082 12845178 ~ 12851346 (+)
CI01000054_12887165_12901376 NA coding downstream 189977 12886994 ~ 12902006 (+)
CI01000054_12982344_12998857 NA coding downstream 283833 12980767 ~ 12999175 (+)
G237369 NA non-coding upstream 84988 12439369 ~ 12439587 (+)
G237075 NA non-coding upstream 97162 12427038 ~ 12427413 (+)
G237072 NA non-coding upstream 103790 12420378 ~ 12420785 (+)
G237069 NA non-coding upstream 123792 12400544 ~ 12400783 (+)
G237068 NA non-coding upstream 124471 12399728 ~ 12400104 (+)
G237436 NA non-coding downstream 173620 12870716 ~ 12878293 (+)
G237621 NA non-coding downstream 257436 12954532 ~ 12954797 (+)
G237627 NA non-coding downstream 269532 12966628 ~ 12966937 (+)
G236874 NA other upstream 708100 11813688 ~ 11816475 (+)
CI01000054_11648262_11648786 NA other upstream 875550 11647959 ~ 11649495 (+)
CI01000054_11633235_11635069 PRF1.8 other upstream 890511 11632959 ~ 11635103 (+)
CI01000054_11564820_11568338 S100V2 other upstream 955576 11564820 ~ 11568999 (+)
G235560 NA other upstream 2132197 10388136 ~ 10392378 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location