CI01000054_12887165_12901376


Basic Information

Item Value
gene id CI01000054_12887165_12901376
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 12886994 ~ 12902006 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_12887165_12901376.mRNA
CTATAAAGGCCAAACTTGAAGAAGCCTCAGCGAGAGTGAGGAAACTGCAGCGGGAGAAGAGTAATGCCTTGAGGAGAGAAAAGAGGGCCAAGATGAACATGTGGGCTCTTCTGGAGGAACTGAAGGAGAAAAATCTCATCAACGAAGAGCTGAAAGACAACCTTGAATGCTACTCAGATCTTCCGGTTCATCTCCTGTCGAGGCAGGGCGTAGAGTACACCAAGGCCCAGAGAGATTTTGCCCTTATGCTCCATCTGCATGGTCCAAAGGCATATCACTACCTGAGAGATACCCTGCATATTCACCTGCCACATCCCAGTTCATTGCAAAGACCTGGTCTCAATAAAATTATGTTGGACATGCTGGAAAGACGGCGTCAGGAAGATGAGGTCAAGTACGGATGTGTCACTCTGATGCTGGATGCCATGTCCATCAAAAATAACGTCCAGTATGATCCTCAGACACAAACAATGTTTGGATATGTGGACATGGGGGATCGATTGAATGAGACTGACATGGCTTCTGATGTTCTTGTGTTTATGGTGGTTGGGCTTCAAGGTTATTGGAAAGCTCCAATTGCATATTATTTGACCAAGTCCCTCACCCCACAATCACAGACAGTCTTAGTAGAGCATGCATTAGAAGAGCTGCATCGTCGTCAGATAAGAGTGGTGTGCATGACAATGGATGGTCATGCATCCAATGTCAATATGTGCACTCAACTTGGGTGTGATCTAAAAGCAGACCCCTGTGGCTGGAATAACAACCCTAATGCCAGCCAGTTCAAGTACATCTTTAGGAAGCTGATGGCCCGGTGTGGGGTTGTTAAACCATGCAGAGGCAATGTGACAGCACAGGATGACACACCAGCTGTCATCGACACCTCTACAAGCCTGTCAGCTGTAGATATGTCCTCTGCAGCAGGAGGAGAAGATCTTCCATACCCGTTTGCTGACATTCCTGCCCTAGTACATGACCACAGCTACCTTCCCGTCCGCTTCGATGGTCTTGTGGACAACGCTTTCGTGTACATTTCAGGATTTGTTGTGCGACGGGCTCTGAAGAAGCTGTCCTGTGATGTCTGCCATGCCAGCCTGGTGACAGACGCTGCATCTGCCATCAAGGACCACAGCTACCACCTGCTGACTTTAAAAAAACAATGGAGGTCTGGTGATTCCATCAGAAGGCACAGTGAGGGTCGTCAGGGCAACAGAGTGGGTCATTCGTCAAGCATCAGCAAGTACCAGACGATCACAGCCCATCAAACTGCTAGAGGTCGTGTACATTGTACGGAAGAGGATAGGCTCTGGCTGAAACCACGGGTCCCGCCCCAAGCCTGGCAACATGGTCGTTGCTCGCTCAAGGGGCTGGCAATCGGGGCGATAGACAAGAAGAAGGTCGTCTTCACAGATGCCTCCAAGATGGGTTGGGGAGCTCTGTGCGACAACCGTCCGGCCTTTGGCGCTTGGAACGGCCCGGAAACTTATGGTTCTCCATTACGACCCCGACCACGTCTGGGCATAACCATGTTCTGTGCCCTCTATATATGTACCCTAGGCCCCTCCAGTGCCCTAGTTATGGGCTTGGGTGGATGACTACTGTGTTTCAGTACCCCATTGTCTGGGCTACCCTGTCTTGAGTGTCTGTCGCGAGTCCTTTTTCAAGTGCTCTGCACTGATGCTCGGTCGTCCCCCTGCATAGCACGGCGTGATTGTACTGTCCCCATAGCGTCTTGTAATCAGTATTAATAAGACGAACGACGCAGTACTCGTGTAGTATCGCAAGGGAATGCACTCGGTTACTAGCATAACCCCGGTTCCCTTAGATACGGAATGAGTACTGCGTTCTTTGCCACGCTATGCGCGAGACGCCTCATGCCGTCGCTTCAGTTGAATTTAATCGATTTGCCATGGTGAGACGGCTGCTTATATAGCCCAAGACCCCGCCCCCTTTGGCGGGCTCGAGCAAGCTCGCTCCCCATTGGCTTGCACATTCTGCGCCGTCATTGGTTCGTTTTCTTTAACTTCACGAACCAATGGCCGTGCAGTTCAAACTGCGTGATTGTATAAAGGCTTCAGAATCGGAGAAAAAGGAGTTTTCCCCATAGCGTCTTGTTTTATTAATTAATATTTATTATTAATAAGACGAACGATGCAGTACTCGTTCCGTATCTTGTTCCGTTTTCTTGTTTGTTTTTTTCTTTTAAAGTTTCAAATATGTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_12887165_12901376.mRNA False 2225 mRNA 0.49 8 12887073 12902006

Neighbor

gene id symbol gene type direction distance location
CI01000054_12846104_12850954 NA coding upstream 35727 12845178 ~ 12851346 (+)
CI01000054_12811634_12819065 NA coding upstream 67793 12811634 ~ 12819280 (+)
CI01000054_12524575_12697096 UNC13C coding upstream 189977 12524575 ~ 12697096 (+)
CI01000054_12321079_12339203 LRCH3 coding upstream 547870 12321079 ~ 12339203 (+)
CI01000054_12318711_12319755 SERP2, SERP1, SERP1.S coding upstream 567103 12318312 ~ 12320602 (+)
CI01000054_12982344_12998857 NA coding downstream 78923 12980767 ~ 12999175 (+)
G237436 NA non-coding upstream 8780 12870716 ~ 12878293 (+)
G237374 NA non-coding upstream 257330 12618522 ~ 12629743 (+)
G237376 NA non-coding upstream 273545 12612022 ~ 12613528 (+)
G237369 NA non-coding upstream 447486 12439369 ~ 12439587 (+)
G237621 NA non-coding downstream 52526 12954532 ~ 12954797 (+)
G237627 NA non-coding downstream 64622 12966628 ~ 12966937 (+)
G236874 NA other upstream 1070598 11813688 ~ 11816475 (+)
CI01000054_11648262_11648786 NA other upstream 1238048 11647959 ~ 11649495 (+)
CI01000054_11633235_11635069 PRF1.8 other upstream 1253009 11632959 ~ 11635103 (+)
CI01000054_11564820_11568338 S100V2 other upstream 1318074 11564820 ~ 11568999 (+)
G235560 NA other upstream 2494695 10388136 ~ 10392378 (+)

Expression


Co-expression Network