G229638


Basic Information

Item Value
gene id G229638
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 184874 ~ 187028 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260590
CCTCATCTGGGTTGCGGTGCAACAGCAAGCTCGTATGCAGGAGTGATGGATCGGGGGATGAGCCAGAGTCCTCTAACAAACACACAAGACAGCCGCACTTGGCAGCTTGCAAATGTGTGATTACCTTGCGGAATGCGGCAGGCAGGTGATGTTGCACAATGACGAGATCCGCAACAGCTGCTGTTTTACCCAAGGGACAGGCGTCCTCTTCTCTAACCAGGGTTTACCAAACCTGTTCTGTGAGGCTGATGTTTGAGGAGCTATCATGTGGGATGATACACTTATCTCCTGAATAGATATTACACTCTAAAAAATGCTGGGTTAAAAACGAACCAAGTTGAGTTGAAAATGGACAAACCCAGCGGCTGGGTTGTTTTGACCCAGCCGTGCCGTTGGGCAAACATTTAACCCATCCACTGTGTTAAAACAACCCAATCGTTGAGTTTGTCCATTTTCAACCCAACTTGGGTTGTTTTTAACCCAGCATTGTTTTAGTGTATCATGAAAATTGGGTGCCAAATTGATATGTATTGCGATTCTACAAGTATCACGCTTCGATATTGCAATGTATTGTGCTTTTTGTTTGCTTTTTCAACATTAGACCATGGTAAAAAAATTAATCATACACTTATATGGACTGTATATGATATTTACAAAAACAATCCATCATATCTTTTATTCCAGCAGCATCAATCAGTACCATACTGCAAAATGCTAATTTCAAATCCTTGGACTCATAATAAGTGGTAGTAAAATGTACAATCGAATTTGTTTTGGGCGTTATGACCGAAATCTGTATCACTGTATTTTTTAAGTATTTTGTATTGAGATATGAATGAATGGCTGTGTTCTGGTATATCCATGACGTGGAGTGGCAGGTATCGGAGGGGTTGGTTAATCTGGTGGCACAGGTGAGGAAGGTGAGGTGCTTTGCATCGTTCTGCAGACAGATGGTTTCCCTCCCTCCCTCGTCTTTCACCGCCATTTCTGCAACGTAAGGCTTCTTTCCGGGTATCGTGCTGACGCGGCAACCCCTTCGTGCAGATCCCGGAGCGTAATGTAGAGAAGCATCACCCAATCCGCCCATCTGAGCCCCTCGCCAGGCGTGCAGTCTCCAGCCCCCCGAGTTTTTCAACCTCTCCAGGTTAGAATGACCGAGCAACCGGAGTCTGTTCTCCTGCTGATCCCCAAAATACCAATTCATTTCTCTCAGTCAGATTCCTCTGCACCTGCACAAAACCACTGGAACTAACAATTCATTTCTCCCAGCATGTCGTGTCCATATGCCTCTGAATGCACGATTACCCTCTGAGTATCAAAGAGGGATTGTAGCTTAGGAACAGTAAGCCTTGATTGCAACAAGCATGTTCTTCATTAGGGATCTATTAGAATCTGTTTTGCATATTTATGTTGCATATGGATCTGGATTAAAGGCTTGTTTGCATACTGTACACAGGAGAGCGTTCTTGTTTTTTAAGATGGTAAAAGAACATGCTAAAAGTAGAAGAACAATTGTTTTTACATTGAGCAGGAGTAAATTTTAATATCAGATTTAATAGAAGGAATAAGTGTGTTAGCTGGAGCGATTGTAACATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260590 True 1597 lncRNA 0.43 2 184874 187028

Neighbor

gene id symbol gene type direction distance location
CI01000054_00157332_00178926 NA coding upstream 4729 157332 ~ 180145 (+)
CI01000054_00131576_00136719 NA coding upstream 48028 130829 ~ 136846 (+)
CI01000054_00239444_00241646 NA coding downstream 52416 239444 ~ 241843 (+)
CI01000054_00248538_00251489 NA coding downstream 60965 247993 ~ 252114 (+)
CI01000054_00390853_00579795 CSMD3 coding downstream 203825 390853 ~ 579795 (+)
CI01000054_00612177_00613764 NA coding downstream 423307 610335 ~ 614879 (+)
CI01000054_00637123_00665809 NA coding downstream 449845 636873 ~ 666129 (+)
G229637 NA non-coding upstream 86852 97764 ~ 98022 (+)
G229630 NA non-coding upstream 96492 88152 ~ 88382 (+)
G229670 NA non-coding downstream 115827 302855 ~ 348887 (+)
G229682 NA non-coding downstream 184602 371630 ~ 371932 (+)
G229717 NA non-coding downstream 673572 860600 ~ 861220 (+)
CI01000054_00916253_00919736 NA non-coding downstream 729088 916116 ~ 919986 (+)
G229736 NA non-coding downstream 730961 917989 ~ 918274 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 1039307 1226335 ~ 1230329 (+)
G229760 NA other downstream 1079322 1266350 ~ 1273750 (+)
G229936 NA other downstream 1210052 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 1391407 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 1463932 1650242 ~ 1666115 (+)

Expression


Co-expression Network