G229670



Basic Information


Item Value
gene id G229670
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 302855 ~ 348887 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU260622
CACATGCTAGTTGATGAGTTGAATCAACTCCACAGCAACTACATAAATTTATCCACTAACCATTCAGAAACATCCAGTTTCACTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGAAGCGCGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACGGTGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGATATAATAAATGATCTGTGGGGTATTTTTTGAGCTGAAACTTCACAGACACATTCTGGGGACACCAGAGACTTATATCACATCTTGTGAAAATGGGGCATAATAGGTCCCCTTTAATCTGCTGTGCGAACTATTCAAATAATTTTTCTGAATCAGTGAATATATGATTGTATGTTTCCATGAAGAACCTTTAGCATCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU260622 True 551 lncRNA 0.42 2 302855 348887

Neighbor


gene id symbol gene type direction distance location
CI01000054_00248538_00251489 NA coding upstream 50741 247993 ~ 252114 (+)
CI01000054_00239444_00241646 NA coding upstream 61012 239444 ~ 241843 (+)
CI01000054_00157332_00178926 NA coding upstream 122710 157332 ~ 180145 (+)
CI01000054_00131576_00136719 NA coding upstream 166009 130829 ~ 136846 (+)
CI01000054_00390853_00579795 CSMD3 coding downstream 41966 390853 ~ 579795 (+)
CI01000054_00612177_00613764 NA coding downstream 261448 610335 ~ 614879 (+)
CI01000054_00637123_00665809 NA coding downstream 287986 636873 ~ 666129 (+)
CI01000054_00666830_00754317 CSMD3 coding downstream 317505 666392 ~ 754317 (+)
CI01000054_00869317_00877277 RAD21B, RAD21 coding downstream 518239 867126 ~ 878129 (+)
G229638 NA non-coding upstream 115827 184874 ~ 187028 (+)
G229637 NA non-coding upstream 204833 97764 ~ 98022 (+)
G229630 NA non-coding upstream 214473 88152 ~ 88382 (+)
G229682 NA non-coding downstream 22743 371630 ~ 371932 (+)
G229717 NA non-coding downstream 511713 860600 ~ 861220 (+)
CI01000054_00916253_00919736 NA non-coding downstream 567229 916116 ~ 919986 (+)
G229736 NA non-coding downstream 569102 917989 ~ 918274 (+)
G229847 NA non-coding downstream 621692 970579 ~ 976960 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 877448 1226335 ~ 1230329 (+)
G229760 NA other downstream 917463 1266350 ~ 1273750 (+)
G229936 NA other downstream 1048193 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 1229548 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 1302073 1650242 ~ 1666115 (+)

Expression



Co-expression Network