G229682


Basic Information

Item Value
gene id G229682
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 371630 ~ 371932 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260635
GATGGGATCAGTATAATCCAGATTTTTTGGATCAAAGGTATCCCAATCTTACTAAAAAGTTTTGAACAACACAAACTGATGATTTTATCCAGATCAAAACCAAGATTGGATTTTGTGATCTAATCTGATTTCAGAACCCTTTTTTCCTTTTGAACAACTGATTTTCAAGATTTGATCCAATCTGATATCCAAAATCTGATCAGATTACTTTTGATCAACTGGCCCTAGGATCTGACCAAGTAATTCACTGAAAATATTTTAATCAAAAATCTGATTTCTTCACAAATCAGACATCACTGGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260635 True 303 lncRNA 0.32 1 371630 371932

Neighbor

gene id symbol gene type direction distance location
CI01000054_00248538_00251489 NA coding upstream 119516 247993 ~ 252114 (+)
CI01000054_00239444_00241646 NA coding upstream 129787 239444 ~ 241843 (+)
CI01000054_00157332_00178926 NA coding upstream 191485 157332 ~ 180145 (+)
CI01000054_00131576_00136719 NA coding upstream 234784 130829 ~ 136846 (+)
CI01000054_00390853_00579795 CSMD3 coding downstream 18921 390853 ~ 579795 (+)
CI01000054_00612177_00613764 NA coding downstream 238403 610335 ~ 614879 (+)
CI01000054_00637123_00665809 NA coding downstream 264941 636873 ~ 666129 (+)
CI01000054_00666830_00754317 CSMD3 coding downstream 294460 666392 ~ 754317 (+)
CI01000054_00869317_00877277 RAD21B, RAD21 coding downstream 495194 867126 ~ 878129 (+)
G229670 NA non-coding upstream 22743 302855 ~ 348887 (+)
G229638 NA non-coding upstream 184602 184874 ~ 187028 (+)
G229637 NA non-coding upstream 273608 97764 ~ 98022 (+)
G229630 NA non-coding upstream 283248 88152 ~ 88382 (+)
G229717 NA non-coding downstream 488668 860600 ~ 861220 (+)
CI01000054_00916253_00919736 NA non-coding downstream 544184 916116 ~ 919986 (+)
G229736 NA non-coding downstream 546057 917989 ~ 918274 (+)
G229847 NA non-coding downstream 598647 970579 ~ 976960 (+)
G229848 NA non-coding downstream 606771 978703 ~ 981912 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 854403 1226335 ~ 1230329 (+)
G229760 NA other downstream 894418 1266350 ~ 1273750 (+)
G229936 NA other downstream 1025148 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 1206503 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 1279028 1650242 ~ 1666115 (+)

Expression


Co-expression Network