G230328



Basic Information


Item Value
gene id G230328
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 915135 ~ 915357 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU261373
AAAATATTTAAATCAATTAAATTCTTTAAAAAATTCTTGATTCAATGACTCACTCATAACTACTTCACTTGTTTCATTACTGGATGAATCAATGTTTTTGAACGAATCTTTTGAATGAATCATTCAATATCAATATGGCCTCCAAGATACAACCGTTATTTAAAGCGCCAAGTTAGTTTTAAAAGGTGATTTGCTCTGTTTTGATCGCTAACGTAGACTTCCG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU261373 True 223 lncRNA 0.30 1 915135 915357

Neighbor


gene id symbol gene type direction distance location
CI01000054_00898039_00902381 NA coding downstream 12754 897542 ~ 902381 (-)
CI01000054_00888859_00895223 LRRC14B coding downstream 19912 888448 ~ 895223 (-)
CI01000054_00195914_00197098 NA coding downstream 717916 195226 ~ 197219 (-)
CI01000054_00188121_00191695 NA coding downstream 723177 187797 ~ 191958 (-)
CI01000054_00147623_00148143 NA coding downstream 766880 147591 ~ 148255 (-)
CI01000054_00924015_00926256 GATAD1 coding upstream 8377 923734 ~ 926256 (-)
CI01000054_00929337_00955240 ANKIB1A coding upstream 13775 929132 ~ 955674 (-)
CI01000054_00965111_00970121 LYPLA2, LYPA2 coding upstream 49285 964642 ~ 970121 (-)
CI01000054_00974025_00979306 PITHD1 coding upstream 58543 973900 ~ 979306 (-)
CI01000054_00979998_00989171 TCEB3 coding upstream 64641 979998 ~ 989171 (-)
G230145 NA non-coding downstream 26976 885254 ~ 888159 (-)
G230148 NA non-coding downstream 28910 863958 ~ 886225 (-)
G230311 NA non-coding downstream 53889 860921 ~ 861246 (-)
G230308 NA non-coding downstream 57574 857336 ~ 857561 (-)
G230305 NA non-coding downstream 61362 853442 ~ 853773 (-)
G230238 NA non-coding upstream 78035 993392 ~ 996451 (-)
G230335 NA non-coding upstream 89909 1005266 ~ 1005502 (-)
G230336 NA non-coding upstream 100366 1015723 ~ 1019141 (-)
G230341 NA non-coding upstream 105317 1020674 ~ 1020880 (-)
G230342 NA non-coding upstream 114264 1029621 ~ 1029829 (-)
G230178 NA other upstream 270176 1185533 ~ 1230135 (-)
G230923 NA other upstream 1921880 2837237 ~ 2837682 (-)
CI01000054_02857402_02860451 NA other upstream 1938784 2857402 ~ 2860573 (-)
G230908 NA other upstream 2142291 3057648 ~ 3063343 (-)
G231645 NA other upstream 3066490 3981847 ~ 3982823 (-)

Expression



Co-expression Network