G229847


Basic Information

Item Value
gene id G229847
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 970579 ~ 976960 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260825
AAAAAAAATAAAATTTATATACTTTTTAACCACAAATGTTCATCTTGCACTGCTCTGCGATGCGCCACGCATTACATAATCACGTTGGAAAGGTCACGCATGACATAGGCAGAAGTACCGCGGTAGGGCGAAAAACTCCATCTCATTTTCTCCTCCAACCTTTTTTTTTTTGTAAAGGCCATTTGACGTAGTCTTTGCACGTTCGCTTCGTAGACACTGGATCGGTACTTCTGCCACCTTTCCAACATGATTACATAATGCGTGGCGCATCGCAGAGCAGCGCAAGACGAGCATTTGTGGTTAAAAGTATATACATTTTTATTTGTTTTTAGAAAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260825 True 339 lncRNA 0.40 2 970579 976960

Neighbor

gene id symbol gene type direction distance location
CI01000054_00916253_00919736 NA coding upstream 50593 916116 ~ 919986 (+)
CI01000054_00885259_00886020 NA coding upstream 84559 885259 ~ 886020 (+)
CI01000054_00879731_00882536 MTERF3 coding upstream 87982 879731 ~ 882597 (+)
CI01000054_00869317_00877277 RAD21B, RAD21 coding upstream 92450 867126 ~ 878129 (+)
CI01000054_00666830_00754317 CSMD3 coding upstream 216262 666392 ~ 754317 (+)
CI01000054_00992036_01004247 NA coding downstream 15076 992036 ~ 1004392 (+)
CI01000054_01007770_01028369 MATN1, SESN2 coding downstream 30692 1007652 ~ 1028832 (+)
CI01000054_01042925_01056338 NA coding downstream 65931 1042891 ~ 1056561 (+)
CI01000054_01087465_01101501 AHDC1, METTL24 coding downstream 109972 1086932 ~ 1101774 (+)
CI01000054_01103702_01106852 NA coding downstream 126481 1103441 ~ 1106852 (+)
G229736 NA non-coding upstream 52305 917989 ~ 918274 (+)
G229717 NA non-coding upstream 109359 860600 ~ 861220 (+)
G229682 NA non-coding upstream 598647 371630 ~ 371932 (+)
G229670 NA non-coding upstream 621692 302855 ~ 348887 (+)
G229848 NA non-coding downstream 1743 978703 ~ 981912 (+)
G229849 NA non-coding downstream 6640 983600 ~ 985153 (+)
G229864 NA non-coding downstream 33761 1010721 ~ 1011128 (+)
G229865 NA non-coding downstream 36215 1013175 ~ 1013401 (+)
G229872 NA non-coding downstream 81048 1058008 ~ 1059151 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 249375 1226335 ~ 1230329 (+)
G229760 NA other downstream 289390 1266350 ~ 1273750 (+)
G229936 NA other downstream 420120 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 601475 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 674000 1650242 ~ 1666115 (+)

Expression


Co-expression Network