G230189


Basic Information

Item Value
gene id G230189
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1055550 ~ 1057442 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU261229
TTCAGTTCAGTAAGCTCAGTATAATAAAATGCACGAACATTACATAACTGTAATACACATTCTTCACTTCAGGGTTACAGTAGAATATCACTGACCCTGAATAGAGAAACAGGTTTGATATCCACTTAAATTATAAACCAAATCACAGAGATATGATGTAAAATACAGTGTAAAAATCCAGGAAACAAAACAATAAAAACAGTAGTTTTTCTTCTCATTTTAAAGGACAGCTCTGAAGGAAGACTTTTTGAATGCCGACATCAATATTGTCTTTAAAGTCACCATAAAACTGCTCTCTAATAAGATAATACAAGACTGTTAGCTTCAAAATTAAACAAAAAGGATTATTATAAAGCAATAACATGACTGGCTAAATGAACACGGCCTAGAGAAACAAACACAAGAGCACTTCAAACTGTTTTGATCAGCTGTGTCTTGAGATGAACACAAGATTTCATTTATGGCTTCTGCATATCAAGACCTTTGCATTCAATTTGCTTTTTTTGGCCAAACAAAAAAATAAAGACTGAATTGCTACATTCAAAAATGCACATTCGGGAGCTGGAAGAGTTTTCTTTGTGATTGGAGTATAGACCTGCATGTCACATTCATCACAAAACATACCTCTGACTAGACAGGTGTGTGAAAATCTGATATCCGGTAGAGGTTTTCGGTTTTATATCAAATGTTCAGTTGACCAGAATAACTCATTAGAAATTACTTGAATATGACAAGATTCAAATACAGTGTTGGATACAGTGAAACAGGCAGGTATTAATATGATTAAATAGGTAACTATTTGCTATTGCCTAAACAAAGAGATGGAATAAGGTGTATTAATATGTGCTGTCATATTTAAACATTAACATCGCCCGTTTTATTACTTCAAAAAAGTGACCCAATCTTGCAGTATCTTGGAAAGCATTTTCAGTTTGAAACTCTCAAGCTAAAGCACAAGATCAGAAATTGCACTAAAGCATGTTCAGAGCCTGTGATTGAGGATCCATGGATCAGTTTATGGAGGTATTGTGATAGAAAGTAAAGGCAATCGCATCTTTCCTGAAGGATATATTGAACTAATGCACTTAAGAGCATATGCGTCTATCACAGGTTCTCTCCAGGCTGGTACTGGGGTTCAGTAGCAGTAAAGTAGTCCTCCAGGAAGCTCTGCAGGTACTCAAAGGTGTGCCTCTCGTCCGGATCCTTCCTCCAGCACTGCAGCATCAGCTCGTGCAGAGACGCTGGGCAGCCCTGGGGAACCGGCATTCGATACCCACGCTCCACCTGTTCCAGCACCTCTCTGTTGTTCATCCCTACACAAATTCAAACACATAGAAAGAGAATTTTATATATATATATATAAAACTACACTTCAAAAAGTTTGGGATAAGTATTATAAGAGTAAGTTGCTGCGTCCCGATTCGCCTACTTATAATACGCCCTAAAAGTGTGTACTCTTCTTGTGAAGAAAAAGTACATACATTTGAGTAACAATAACAGTACAGTGTAACAGTAAAGACTTTTATAATAAACTTTTGGTTAGACTTTATTTCGATAGTCCACTTTAGACATTCTACTCACTATAAGTAACTTTGCAACTACATGTCAACTAACTTTCACTAGAGTATTAGTAGACTGTTAGGTTTGGGTTAGTAAAATAAGTTGACATGTAATTAAAAGGTTACTTATATAGTCAGTAGAATGTCTGTTGGGAGCACCAAATAAATTGTCAGCAGAAAATACTACAGAGTGGGTAACAATATTGTGAGAAACACGATTGTGAATTTAAAATTCAAATTCTTTAAATGCGACCTATTATGCCCCTTTTCACAAGATGTAATATAAGTCTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261229 True 1853 lncRNA 0.36 2 1055550 1057442

Neighbor

gene id symbol gene type direction distance location
CI01000054_00979998_00989171 TCEB3 coding downstream 66379 979998 ~ 989171 (-)
CI01000054_00974025_00979306 PITHD1 coding downstream 76244 973900 ~ 979306 (-)
CI01000054_00965111_00970121 LYPLA2, LYPA2 coding downstream 85429 964642 ~ 970121 (-)
CI01000054_00929337_00955240 ANKIB1A coding downstream 99876 929132 ~ 955674 (-)
CI01000054_00924015_00926256 GATAD1 coding downstream 129294 923734 ~ 926256 (-)
CI01000054_01115294_01116274 GPR3, GPR6, GPR186 coding upstream 57251 1114693 ~ 1116822 (-)
CI01000054_01151083_01156699 FAM83HB coding upstream 93282 1150724 ~ 1158172 (-)
CI01000054_01203148_01209012 PPT1 coding upstream 145463 1202905 ~ 1209135 (-)
CI01000054_01246516_01250511 KLHL43 coding upstream 187439 1244881 ~ 1251249 (-)
CI01000054_01257527_01259314 NA coding upstream 200085 1257527 ~ 1259314 (-)
G230342 NA non-coding downstream 25721 1029621 ~ 1029829 (-)
G230341 NA non-coding downstream 34670 1020674 ~ 1020880 (-)
G230336 NA non-coding downstream 36409 1015723 ~ 1019141 (-)
G230335 NA non-coding downstream 50048 1005266 ~ 1005502 (-)
G230238 NA non-coding downstream 59099 993392 ~ 996451 (-)
G230343 NA non-coding upstream 4130 1061572 ~ 1061892 (-)
G230344 NA non-coding upstream 5171 1062613 ~ 1062914 (-)
G230346 NA non-coding upstream 6319 1063761 ~ 1063961 (-)
G230356 NA non-coding upstream 53824 1111266 ~ 1111518 (-)
G230251 NA non-coding upstream 86732 1144174 ~ 1144586 (-)
G230178 NA other upstream 128091 1185533 ~ 1230135 (-)
G230923 NA other upstream 1779795 2837237 ~ 2837682 (-)
CI01000054_02857402_02860451 NA other upstream 1796699 2857402 ~ 2860573 (-)
G230908 NA other upstream 2000206 3057648 ~ 3063343 (-)
G231645 NA other upstream 2924405 3981847 ~ 3982823 (-)

Expression


Co-expression Network