G229883


Basic Information

Item Value
gene id G229883
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1122092 ~ 1122351 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260874
GAAAGTATCTACATTGGCAATATATTTTGGCCATTTTTGTATATTTCAAAACATAAAAACAAATATTGTGACGTTCCTTTCGGCTGTCATTGTTTTTCTTTTCCCTTTTGGTATGTGTTTGTGTGTTATATATAATATACGCATCCACAGCCTTTTACCTTACACTAGAATTGTATCCTAAAACCTTTTCTGGACCACCAGAGAGATAGACTAACATAAAGAAGGTCAAAAGAACCAGTATGGACCTGCATCTGTTGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260874 True 260 lncRNA 0.35 1 1122092 1122351

Neighbor

gene id symbol gene type direction distance location
CI01000054_01103702_01106852 NA coding upstream 15240 1103441 ~ 1106852 (+)
CI01000054_01087465_01101501 AHDC1, METTL24 coding upstream 20318 1086932 ~ 1101774 (+)
CI01000054_01042925_01056338 NA coding upstream 65531 1042891 ~ 1056561 (+)
CI01000054_01007770_01028369 MATN1, SESN2 coding upstream 93260 1007652 ~ 1028832 (+)
CI01000054_00992036_01004247 NA coding upstream 117700 992036 ~ 1004392 (+)
CI01000054_01122882_01126143 NA coding downstream 531 1122882 ~ 1126784 (+)
CI01000054_01133011_01143370 NA coding downstream 10660 1133011 ~ 1143612 (+)
CI01000054_01173734_01187846 KIAA0319L coding downstream 51383 1173734 ~ 1188947 (+)
CI01000054_01190021_01201007 CAP1 coding downstream 67670 1190021 ~ 1201723 (+)
CI01000054_01212755_01219670 NA coding downstream 90195 1212546 ~ 1220783 (+)
G229872 NA non-coding upstream 62941 1058008 ~ 1059151 (+)
G229865 NA non-coding upstream 108691 1013175 ~ 1013401 (+)
G229864 NA non-coding upstream 110964 1010721 ~ 1011128 (+)
G229849 NA non-coding upstream 136939 983600 ~ 985153 (+)
G229848 NA non-coding upstream 140180 978703 ~ 981912 (+)
G229806 NA non-coding downstream 21782 1144133 ~ 1144557 (+)
G229770 NA non-coding downstream 23939 1146290 ~ 1151146 (+)
G229831 NA non-coding downstream 38851 1161202 ~ 1161520 (+)
G229891 NA non-coding downstream 46260 1168611 ~ 1168843 (+)
G229779 NA non-coding downstream 121423 1243774 ~ 1244341 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 103984 1226335 ~ 1230329 (+)
G229760 NA other downstream 143999 1266350 ~ 1273750 (+)
G229936 NA other downstream 274729 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 456084 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 528609 1650242 ~ 1666115 (+)

Expression


Co-expression Network