G229806


Basic Information

Item Value
gene id G229806
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1144133 ~ 1144557 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260784
AACATTGAACATTGTTTCTTGTATACAGTCCTGTGTCACAACTGAGGTCAAGAAAAATACAAGCAGACATGCACATATTACTGATTTAACAAGAAAGATTGCTCTCAGATTTTGTTAGGCATTATAAGCTAAATGGTTGTTGTTTTGGTTATACATGTAAAAAGCATGATATCCTTGGTTCAAATGTATGTTTTAGAATCCATGAGCAATGGATCTGGTTTATAAGCATCATTACATGTAATTCAAGTTCATTTTCTTTTGTAATTTTCAGTGTTACTGACAATTCATATTCTTTAAAAACTGACCAAGTAGAAGAAATTAATTTAGAGAGAAAACAGTTGAATGTTCAGACTTGTTTAATCCAGTATTTCTTAATTTTTTTGTCATGGCTGTCATAATTGAATTTAAAGTTCATGTTGTCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260784 True 425 lncRNA 0.30 1 1144133 1144557

Neighbor

gene id symbol gene type direction distance location
CI01000054_01133011_01143370 NA coding upstream 521 1133011 ~ 1143612 (+)
CI01000054_01122882_01126143 NA coding upstream 17349 1122882 ~ 1126784 (+)
CI01000054_01103702_01106852 NA coding upstream 37281 1103441 ~ 1106852 (+)
CI01000054_01087465_01101501 AHDC1, METTL24 coding upstream 42359 1086932 ~ 1101774 (+)
CI01000054_01042925_01056338 NA coding upstream 87572 1042891 ~ 1056561 (+)
CI01000054_01173734_01187846 KIAA0319L coding downstream 29177 1173734 ~ 1188947 (+)
CI01000054_01190021_01201007 CAP1 coding downstream 45464 1190021 ~ 1201723 (+)
CI01000054_01212755_01219670 NA coding downstream 67989 1212546 ~ 1220783 (+)
CI01000054_01227110_01229796 EEF1A1L1 coding downstream 81822 1226335 ~ 1230329 (+)
CI01000054_01231236_01238870 NA coding downstream 86232 1230789 ~ 1239069 (+)
G229883 NA non-coding upstream 21782 1122092 ~ 1122351 (+)
G229872 NA non-coding upstream 84982 1058008 ~ 1059151 (+)
G229865 NA non-coding upstream 130732 1013175 ~ 1013401 (+)
G229864 NA non-coding upstream 133005 1010721 ~ 1011128 (+)
G229849 NA non-coding upstream 158980 983600 ~ 985153 (+)
G229770 NA non-coding downstream 1733 1146290 ~ 1151146 (+)
G229831 NA non-coding downstream 16645 1161202 ~ 1161520 (+)
G229891 NA non-coding downstream 24054 1168611 ~ 1168843 (+)
G229779 NA non-coding downstream 99217 1243774 ~ 1244341 (+)
G229919 NA non-coding downstream 160320 1304877 ~ 1305133 (+)
G229760 NA other downstream 121793 1266350 ~ 1273750 (+)
G229936 NA other downstream 252523 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 433878 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 506403 1650242 ~ 1666115 (+)

Expression


Co-expression Network