G229779


Basic Information

Item Value
gene id G229779
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1243774 ~ 1244341 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260757
TTGTGTTCCGAAGATGAATGAAGGTCTTATGGGTGTGGAACGACATGAGGGTGAGTAATAAGTGACATTTTTATTTATGGGTGAACTAACCCTTTAATGCCAGGCATGAGTTCTATGTACTACTGTTTGTCTTGCTGTGCTATCTATGACTGCAAATTTTAATATTGAACAAAACCTGTCAGAAGTTCAAGCCTCTTATTGTATATTTAAACAATTTAACTATGAATCTTCAGTTGTTAGTTCACATTCCAGTGCCAACTGTAATATTAATGAGCTTCGTCTTGGTGTTTTACAAATCAGTTAAAATGTTTCTATACACCTAGACTGTAAAGTAGAAACGTGCGGATTTTGTAAAGCTGCTTTGAAACTGTGTTGTGAAAACCGTTATACAAGTAAATGTGAATTGAATAGACAGTGTTTGAGTAGATATCAAATTTGTGTATTCTATTTTTCTGAATTTACATACTCTTTATTCTTTGTCTTTCAGTATGATGGCATCATCCTCCCCGGCAAGTAAAGGACCACCTTTTTTGAATTTGTCACAAATAAAAGAAAAGCCCAAATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260757 True 568 lncRNA 0.34 1 1243774 1244341

Neighbor

gene id symbol gene type direction distance location
CI01000054_01231236_01238870 NA coding upstream 4705 1230789 ~ 1239069 (+)
CI01000054_01227110_01229796 EEF1A1L1 coding upstream 13716 1226335 ~ 1230329 (+)
CI01000054_01212755_01219670 NA coding upstream 22991 1212546 ~ 1220783 (+)
CI01000054_01190021_01201007 CAP1 coding upstream 42051 1190021 ~ 1201723 (+)
CI01000054_01173734_01187846 KIAA0319L coding upstream 54827 1173734 ~ 1188947 (+)
CI01000054_01353780_01357766 ZCCHC17 coding downstream 109227 1353568 ~ 1357859 (+)
CI01000054_01368287_01374709 DCLK3 coding downstream 123946 1368287 ~ 1375026 (+)
CI01000054_01378423_01387679 CYHR1, CYHR1.L, CYHR1.S coding downstream 133952 1378293 ~ 1388263 (+)
CI01000054_01535826_01544666 NA coding downstream 291485 1535826 ~ 1545550 (+)
CI01000054_01556797_01565522 FKBP9 coding downstream 312456 1556797 ~ 1565787 (+)
G229891 NA non-coding upstream 74931 1168611 ~ 1168843 (+)
G229831 NA non-coding upstream 82254 1161202 ~ 1161520 (+)
G229770 NA non-coding upstream 92628 1146290 ~ 1151146 (+)
G229806 NA non-coding upstream 99217 1144133 ~ 1144557 (+)
G229883 NA non-coding upstream 121423 1122092 ~ 1122351 (+)
G229919 NA non-coding downstream 60536 1304877 ~ 1305133 (+)
G229745 NA non-coding downstream 62029 1306370 ~ 1311971 (+)
G229746 NA non-coding downstream 70291 1314632 ~ 1331530 (+)
G229933 NA non-coding downstream 146426 1390767 ~ 1391918 (+)
G229936 NA non-coding downstream 158833 1397080 ~ 1407130 (+)
G229760 NA other downstream 22009 1266350 ~ 1273750 (+)
CI01000054_01578022_01579167 NA other downstream 334094 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 406619 1650242 ~ 1666115 (+)
CI01000054_01725792_01726688 NA other downstream 481328 1725627 ~ 1726793 (+)

Expression


Co-expression Network