G229822


Basic Information

Item Value
gene id G229822
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1413565 ~ 1413922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260800
TGCTAGTGATAGATATATAGTGGATGAAGCTTAAATACTCTATTAGAGCTAGTGTATAAAAGTTTTGACCCCCTCAATGAAAGCATATGGGACTTTTTGCAGTTTTGATCGTCCGTTTAACCCCGTTGACATCAGTTTGGTGTTTGTAGCTCTAAAGCTCCAAGAGGAGATACTGTTTACATTCTGGCTCAGAAGAATAATAATAATCTTAAATAGTAGATCAGTAGTTTAGCTTTCTCAAGTCAACTTAACAATGCACAGCTCAAGTGTATGTGCACAGAGTTTGTGCTAAGGGCGAAAGAAAACATCCTTACATAATCAAAACACTCTGATACCTCGATAAACATTCATCTATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260800 True 358 lncRNA 0.37 1 1413565 1413922

Neighbor

gene id symbol gene type direction distance location
CI01000054_01378423_01387679 CYHR1, CYHR1.L, CYHR1.S coding upstream 25302 1378293 ~ 1388263 (+)
CI01000054_01368287_01374709 DCLK3 coding upstream 38539 1368287 ~ 1375026 (+)
CI01000054_01353780_01357766 ZCCHC17 coding upstream 55706 1353568 ~ 1357859 (+)
CI01000054_01231236_01238870 NA coding upstream 174496 1230789 ~ 1239069 (+)
CI01000054_01227110_01229796 EEF1A1L1 coding upstream 183507 1226335 ~ 1230329 (+)
CI01000054_01535826_01544666 NA coding downstream 121904 1535826 ~ 1545550 (+)
CI01000054_01556797_01565522 FKBP9 coding downstream 142875 1556797 ~ 1565787 (+)
CI01000054_01568746_01575755 SYTL1 coding downstream 154824 1568746 ~ 1575755 (+)
CI01000054_01578022_01579167 NA coding downstream 164100 1578022 ~ 1579356 (+)
CI01000054_01589927_01595736 NA coding downstream 175046 1588883 ~ 1595857 (+)
G229936 NA non-coding upstream 6435 1397080 ~ 1407130 (+)
G229933 NA non-coding upstream 21647 1390767 ~ 1391918 (+)
G229746 NA non-coding upstream 82035 1314632 ~ 1331530 (+)
G229745 NA non-coding upstream 101594 1306370 ~ 1311971 (+)
G229919 NA non-coding upstream 108432 1304877 ~ 1305133 (+)
G229762 NA non-coding downstream 43872 1457794 ~ 1459261 (+)
G229792 NA non-coding downstream 54357 1468279 ~ 1472052 (+)
G229763 NA non-coding downstream 58269 1472191 ~ 1474920 (+)
G229953 NA non-coding downstream 87393 1501315 ~ 1501896 (+)
G229954 NA non-coding downstream 89522 1503444 ~ 1503652 (+)
G229760 NA other upstream 139815 1266350 ~ 1273750 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 237038 1650242 ~ 1666115 (+)
CI01000054_01725792_01726688 NA other downstream 311747 1725627 ~ 1726793 (+)
CI01000054_02289802_02330591 SLC25A13 other downstream 875909 2289802 ~ 2330981 (+)
G230689 NA other downstream 1664580 3078502 ~ 3087392 (+)

Expression


Co-expression Network