Gene
RNA
| Item | Value |
|---|---|
| gene id | G229958 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 1516335 ~ 1518558 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU260956 | True | 835 | lncRNA | 0.44 | 2 | 1516335 | 1518558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_01378423_01387679 | CYHR1, CYHR1.L, CYHR1.S | coding | upstream | 128072 | 1378293 ~ 1388263 (+) |
| CI01000054_01368287_01374709 | DCLK3 | coding | upstream | 141309 | 1368287 ~ 1375026 (+) |
| CI01000054_01353780_01357766 | ZCCHC17 | coding | upstream | 158476 | 1353568 ~ 1357859 (+) |
| CI01000054_01231236_01238870 | NA | coding | upstream | 277266 | 1230789 ~ 1239069 (+) |
| CI01000054_01227110_01229796 | EEF1A1L1 | coding | upstream | 286277 | 1226335 ~ 1230329 (+) |
| CI01000054_01535826_01544666 | NA | coding | downstream | 17268 | 1535826 ~ 1545550 (+) |
| CI01000054_01556797_01565522 | FKBP9 | coding | downstream | 38239 | 1556797 ~ 1565787 (+) |
| CI01000054_01568746_01575755 | SYTL1 | coding | downstream | 50188 | 1568746 ~ 1575755 (+) |
| CI01000054_01578022_01579167 | NA | coding | downstream | 59464 | 1578022 ~ 1579356 (+) |
| CI01000054_01589927_01595736 | NA | coding | downstream | 70410 | 1588883 ~ 1595857 (+) |
| G229764 | NA | non-coding | upstream | 2331 | 1513144 ~ 1514004 (+) |
| G229956 | NA | non-coding | upstream | 6536 | 1508570 ~ 1509799 (+) |
| G229811 | NA | non-coding | upstream | 7855 | 1508033 ~ 1508480 (+) |
| G229955 | NA | non-coding | upstream | 11612 | 1504324 ~ 1504723 (+) |
| G229954 | NA | non-coding | upstream | 12683 | 1503444 ~ 1503652 (+) |
| G229815 | NA | non-coding | downstream | 66779 | 1585337 ~ 1586014 (+) |
| G229967 | NA | non-coding | downstream | 85766 | 1604324 ~ 1604605 (+) |
| CI01000054_01639395_01647833 | VPS45, VPS45.S | non-coding | downstream | 129737 | 1639395 ~ 1648954 (+) |
| G230449 | NA | non-coding | downstream | 217284 | 1735842 ~ 1739334 (+) |
| G229936 | NA | other | upstream | 109205 | 1397080 ~ 1407130 (+) |
| G229760 | NA | other | upstream | 242585 | 1266350 ~ 1273750 (+) |
| CI01000054_01650242_01665628 | PLEKHO1A | other | downstream | 132402 | 1650242 ~ 1666115 (+) |
| CI01000054_01725792_01726688 | NA | other | downstream | 207111 | 1725627 ~ 1726793 (+) |
| CI01000054_02289802_02330591 | SLC25A13 | other | downstream | 771273 | 2289802 ~ 2330981 (+) |
| G230689 | NA | other | downstream | 1559944 | 3078502 ~ 3087392 (+) |
