G229815


Basic Information

Item Value
gene id G229815
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1585337 ~ 1586014 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260793
AATTCTTGCTGTGTCTCATTCCAGGGTGTGTCTGTAAACTTCAAACATGGCGGAGAAGATAACAACTGATGGTTAAGTTTTATCCTTTTTACCCACATCATCTACATTGCTTTCTCTTGTGTTTACAGTAGTGTATATATACGTATATAAATAACCATTCTATTTTTTTTATGTATTTTTTTATACTGCGAAAACAGCATTTATTTGACGGACATTCCTGAACGGTCGCAGTGAATGTTTGACCATGGCTGGATTTACACTGCAAGTCTTAATGCACAAATCCGATCTTTTGACCATATCCGATTTTTTGGCCAGTGTGTTTACATTCACTTTAGACGCGACTGGTATCCGATATCTGTGTTTACATTACTTCCTGCCCCAAAATGATTGTCATTGATAGTTTTACATGCACATAGCAGACCCTCGGGTTTTGAATGTCCGTGCTATTAAAATTATTTATATATTTCATGTCGAGTGGCCATGATTACCTGTCAGAATGGATGAGTTAACAGCTGTCAGTGTCATGGATGTATTGCAGCGCGAATTCTGACTGAACGAATATAGACCGGAAAATAAAGGTAATTTGCGTTTGATATTTTATCTACAGTTATCAGTTTTAGAATTCCATTTTTTTAATGAATTTGAGCAAGCTAGGGAGAGAGTGCGCGCGCGCGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260793 True 678 lncRNA 0.37 1 1585337 1586014

Neighbor

gene id symbol gene type direction distance location
CI01000054_01578022_01579167 NA coding upstream 5981 1578022 ~ 1579356 (+)
CI01000054_01568746_01575755 SYTL1 coding upstream 9582 1568746 ~ 1575755 (+)
CI01000054_01556797_01565522 FKBP9 coding upstream 19550 1556797 ~ 1565787 (+)
CI01000054_01535826_01544666 NA coding upstream 39787 1535826 ~ 1545550 (+)
CI01000054_01378423_01387679 CYHR1, CYHR1.L, CYHR1.S coding upstream 197074 1378293 ~ 1388263 (+)
CI01000054_01589927_01595736 NA coding downstream 2954 1588883 ~ 1595857 (+)
CI01000054_01613638_01617674 PSB4, PSMB4, PSMB4.L coding downstream 27304 1613318 ~ 1618357 (+)
CI01000054_01634335_01637623 NA coding downstream 48321 1634335 ~ 1637922 (+)
CI01000054_01639395_01647833 VPS45, VPS45.S coding downstream 53381 1639395 ~ 1648954 (+)
CI01000054_01650242_01665628 PLEKHO1A coding downstream 64228 1650242 ~ 1666115 (+)
G229958 NA non-coding upstream 66779 1516335 ~ 1518558 (+)
G229764 NA non-coding upstream 71333 1513144 ~ 1514004 (+)
G229956 NA non-coding upstream 75538 1508570 ~ 1509799 (+)
G229811 NA non-coding upstream 76857 1508033 ~ 1508480 (+)
G229955 NA non-coding upstream 80614 1504324 ~ 1504723 (+)
G229967 NA non-coding downstream 18310 1604324 ~ 1604605 (+)
G230449 NA non-coding downstream 149828 1735842 ~ 1739334 (+)
G230462 NA non-coding downstream 181409 1767423 ~ 1807305 (+)
G229936 NA other upstream 178207 1397080 ~ 1407130 (+)
G229760 NA other upstream 311587 1266350 ~ 1273750 (+)
CI01000054_01227110_01229796 EEF1A1L1 other upstream 355008 1226335 ~ 1230329 (+)
CI01000054_01725792_01726688 NA other downstream 139655 1725627 ~ 1726793 (+)
CI01000054_02289802_02330591 SLC25A13 other downstream 703817 2289802 ~ 2330981 (+)
G230689 NA other downstream 1492488 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 2322437 3848427 ~ 3914231 (+)

Expression


Co-expression Network