Gene
RNA
| Item | Value |
|---|---|
| gene id | G230462 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 1767423 ~ 1807305 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU261535 | False | 1215 | lncRNA | 0.40 | 2 | 1767423 | 1807305 |
| TU261532 | False | 1238 | lncRNA | 0.40 | 2 | 1801712 | 1807305 |
| TU261533 | True | 1239 | lncRNA | 0.40 | 2 | 1801712 | 1807305 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_01725792_01726688 | NA | coding | upstream | 40683 | 1725627 ~ 1726793 (+) |
| CI01000054_01706858_01711137 | NA | coding | upstream | 56173 | 1705732 ~ 1711250 (+) |
| CI01000054_01650242_01665628 | PLEKHO1A | coding | upstream | 101308 | 1650242 ~ 1666115 (+) |
| CI01000054_01639395_01647833 | VPS45, VPS45.S | coding | upstream | 118543 | 1639395 ~ 1648954 (+) |
| CI01000054_01634335_01637623 | NA | coding | upstream | 129501 | 1634335 ~ 1637922 (+) |
| CI01000054_01871659_01875753 | NA | coding | downstream | 64243 | 1871548 ~ 1876210 (+) |
| CI01000054_01879983_01965668 | TRIO, TRIOA | coding | downstream | 72678 | 1879983 ~ 1966159 (+) |
| CI01000054_02024879_02026284 | NA | coding | downstream | 217574 | 2024879 ~ 2027615 (+) |
| CI01000054_02096054_02105211 | GNRHR1, GNRH-R | coding | downstream | 288749 | 2096054 ~ 2105265 (+) |
| CI01000054_02195667_02196307 | CHRAC1 | coding | downstream | 388362 | 2195667 ~ 2196853 (+) |
| G230449 | NA | non-coding | upstream | 28089 | 1735842 ~ 1739334 (+) |
| G229967 | NA | non-coding | upstream | 162818 | 1604324 ~ 1604605 (+) |
| CI01000054_01589927_01595736 | NA | non-coding | upstream | 178393 | 1588883 ~ 1595857 (+) |
| G229815 | NA | non-coding | upstream | 181409 | 1585337 ~ 1586014 (+) |
| G230463 | NA | non-coding | downstream | 50883 | 1858188 ~ 1971861 (+) |
| G230496 | NA | non-coding | downstream | 202697 | 2010002 ~ 2010436 (+) |
| G230500 | NA | non-coding | downstream | 208969 | 2016274 ~ 2018368 (+) |
| G230475 | NA | non-coding | downstream | 274720 | 2082025 ~ 2082459 (+) |
| CI01000054_01578022_01579167 | NA | other | upstream | 185354 | 1578022 ~ 1579356 (+) |
| G229936 | NA | other | upstream | 360293 | 1397080 ~ 1407130 (+) |
| G229760 | NA | other | upstream | 493673 | 1266350 ~ 1273750 (+) |
| CI01000054_02289802_02330591 | SLC25A13 | other | downstream | 482526 | 2289802 ~ 2330981 (+) |
| G230689 | NA | other | downstream | 1271197 | 3078502 ~ 3087392 (+) |
| CI01000054_03848427_03914231 | NA | other | downstream | 2101146 | 3848427 ~ 3914231 (+) |
| G231863 | NA | other | downstream | 2599847 | 4407152 ~ 4450730 (+) |
| CI01000054_05608892_05634793 | RNF19B | other | downstream | 3815710 | 5608457 ~ 5634804 (+) |
