G230659


Basic Information

Item Value
gene id G230659
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 2178841 ~ 2179094 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU261795
GGAAAGTAGAGGGATGACAGGAAATGATGGGGAAAAGAGGGTGTAGTAGATTTGAAGTCCTATTATTACCCAGTTAAGCGCCACAAACAGGGTTATTATCATCAACTAAAACATTTCTGTTCATTGAAATAAAGCTGAAATACATATAAATATTAGTTGAAAAACTAAATGAAATTAGAAATGTTGCCTTGGCAATAAACTGAAATCTTTTTAAGTTGAAGCACTAAAGTTATTAACTGGAAATAAATACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261795 True 254 lncRNA 0.31 1 2178841 2179094

Neighbor

gene id symbol gene type direction distance location
CI01000054_02096054_02105211 GNRHR1, GNRH-R coding upstream 73576 2096054 ~ 2105265 (+)
CI01000054_02024879_02026284 NA coding upstream 151262 2024879 ~ 2027615 (+)
CI01000054_01879983_01965668 TRIO, TRIOA coding upstream 212682 1879983 ~ 1966159 (+)
CI01000054_01871659_01875753 NA coding upstream 302631 1871548 ~ 1876210 (+)
CI01000054_01725792_01726688 NA coding upstream 452101 1725627 ~ 1726793 (+)
CI01000054_02195667_02196307 CHRAC1 coding downstream 16573 2195667 ~ 2196853 (+)
CI01000054_02225261_02226820 DLX5, DLX5A coding downstream 45433 2224527 ~ 2227071 (+)
CI01000054_02239241_02261796 NA coding downstream 59230 2238324 ~ 2261858 (+)
CI01000054_02272856_02274337 SHFM1, SHFM1.S, DSS1 coding downstream 92095 2271189 ~ 2274545 (+)
CI01000054_02289802_02330591 SLC25A13 coding downstream 110708 2289802 ~ 2330981 (+)
G230634 NA non-coding upstream 45285 2133244 ~ 2133556 (+)
G230632 NA non-coding upstream 46804 2131697 ~ 2132037 (+)
G230624 NA non-coding upstream 54104 2124367 ~ 2124737 (+)
G230622 NA non-coding upstream 56177 2122321 ~ 2122664 (+)
G230617 NA non-coding upstream 63024 2115436 ~ 2115817 (+)
G230759 NA non-coding downstream 256930 2436024 ~ 2437452 (+)
G230773 NA non-coding downstream 295508 2474602 ~ 2474818 (+)
G230775 NA non-coding downstream 297229 2476323 ~ 2476931 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 517276 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 596772 1578022 ~ 1579356 (+)
G229936 NA other upstream 771711 1397080 ~ 1407130 (+)
G229760 NA other upstream 905091 1266350 ~ 1273750 (+)
G230689 NA other downstream 899408 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 1729357 3848427 ~ 3914231 (+)
G231863 NA other downstream 2228058 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 3443921 5608457 ~ 5634804 (+)

Expression


Co-expression Network