Gene
RNA
| Item | Value |
|---|---|
| gene id | G230775 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 2476323 ~ 2476931 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU261926 | True | 609 | lncRNA | 0.39 | 1 | 2476323 | 2476931 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_02417068_02430580 | PDK4 | coding | upstream | 45007 | 2417068 ~ 2431316 (+) |
| CI01000054_02289802_02330591 | SLC25A13 | coding | upstream | 145342 | 2289802 ~ 2330981 (+) |
| CI01000054_02272856_02274337 | SHFM1, SHFM1.S, DSS1 | coding | upstream | 201798 | 2271189 ~ 2274545 (+) |
| CI01000054_02239241_02261796 | NA | coding | upstream | 214465 | 2238324 ~ 2261858 (+) |
| CI01000054_02225261_02226820 | DLX5, DLX5A | coding | upstream | 249252 | 2224527 ~ 2227071 (+) |
| CI01000054_02500503_02511195 | SGCE | coding | downstream | 23572 | 2500503 ~ 2511195 (+) |
| CI01000054_02564258_02570248 | NA | coding | downstream | 86761 | 2563692 ~ 2570405 (+) |
| CI01000054_02589793_02592201 | BET1 | coding | downstream | 112862 | 2589793 ~ 2592926 (+) |
| CI01000054_02613166_02614884 | TFPI2 | coding | downstream | 136127 | 2613058 ~ 2615458 (+) |
| CI01000054_02652696_02685815 | CALCR | coding | downstream | 175765 | 2652696 ~ 2685833 (+) |
| G230773 | NA | non-coding | upstream | 1505 | 2474602 ~ 2474818 (+) |
| G230759 | NA | non-coding | upstream | 38871 | 2436024 ~ 2437452 (+) |
| G230659 | NA | non-coding | upstream | 297229 | 2178841 ~ 2179094 (+) |
| G230776 | NA | non-coding | downstream | 363 | 2477294 ~ 2477529 (+) |
| G230777 | NA | non-coding | downstream | 701 | 2477632 ~ 2477844 (+) |
| G230778 | NA | non-coding | downstream | 2467 | 2479398 ~ 2479733 (+) |
| G230779 | NA | non-coding | downstream | 5200 | 2482131 ~ 2482368 (+) |
| G230780 | NA | non-coding | downstream | 9501 | 2486432 ~ 2486697 (+) |
| CI01000054_01725792_01726688 | NA | other | upstream | 749530 | 1725627 ~ 1726793 (+) |
| CI01000054_01650242_01665628 | PLEKHO1A | other | upstream | 814758 | 1650242 ~ 1666115 (+) |
| CI01000054_01578022_01579167 | NA | other | upstream | 894254 | 1578022 ~ 1579356 (+) |
| G229936 | NA | other | upstream | 1069193 | 1397080 ~ 1407130 (+) |
| G230689 | NA | other | downstream | 601571 | 3078502 ~ 3087392 (+) |
| CI01000054_03848427_03914231 | NA | other | downstream | 1431520 | 3848427 ~ 3914231 (+) |
| G231863 | NA | other | downstream | 1930221 | 4407152 ~ 4450730 (+) |
| CI01000054_05608892_05634793 | RNF19B | other | downstream | 3146084 | 5608457 ~ 5634804 (+) |
| G232558 | NA | other | downstream | 3516729 | 5993660 ~ 6041863 (+) |
