G230816


Basic Information

Item Value
gene id G230816
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 2696513 ~ 2697025 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU261968
TTTATTGAATCCAAAAGGTTTTAATTATATTTTGCTACATATAAAGGTATATTAAAGTTTTTGAAGTGTCAAAAGGTCATTTGGTTTAACTGTCCTAAGGCCAATACAGCCATTTCATTTGTGATTAAAATATCTTAAAATGTAATAAATGTATATATTTTTTATTCTGGCATGATTTTATAACATCATATATTAACATAGTGCAAAATGGTATTGAAATTATGTGTAGAAGTCGTTGCTTTGTTATGAGAAAGAATGTCCAGAAAAATGAATTTCATTGATGTCATTCGGAGTAACCAATAGAAAGGGACCATTTTGGATCAAGTCATGTGGTCAATATCATGTGACAGGATGGGACATCATTCAGACACCTGCAAATGACCACATGGTCATGCAGCAAAGTATCTAACTCTCTTTTAACTATTTGAAAAATTCATGTTTTCACTTGCTTATACGCATGTCCAGAAACATCAGGTCATTCGGTACAACCTCTATAAAACATGGAAAAGGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261968 True 513 lncRNA 0.31 1 2696513 2697025

Neighbor

gene id symbol gene type direction distance location
CI01000054_02652696_02685815 CALCR coding upstream 10680 2652696 ~ 2685833 (+)
CI01000054_02613166_02614884 TFPI2 coding upstream 81055 2613058 ~ 2615458 (+)
CI01000054_02589793_02592201 BET1 coding upstream 103587 2589793 ~ 2592926 (+)
CI01000054_02564258_02570248 NA coding upstream 126108 2563692 ~ 2570405 (+)
CI01000054_02500503_02511195 SGCE coding upstream 185318 2500503 ~ 2511195 (+)
CI01000054_02824071_02824355 NA coding downstream 127000 2824025 ~ 2824642 (+)
CI01000054_02951289_02967370 NA coding downstream 253890 2950915 ~ 2967660 (+)
CI01000054_02975008_02985278 EFCAB1 coding downstream 277563 2974588 ~ 2985335 (+)
CI01000054_03016199_03016501 NA coding downstream 318934 3015959 ~ 3016693 (+)
CI01000054_03424472_03425704 NA coding downstream 726029 3423054 ~ 3426433 (+)
G230707 NA non-coding upstream 7298 2633291 ~ 2689215 (+)
G230812 NA non-coding upstream 84135 2611396 ~ 2612378 (+)
G230802 NA non-coding upstream 109375 2586915 ~ 2587138 (+)
G230710 NA non-coding upstream 112740 2582411 ~ 2583773 (+)
G230798 NA non-coding upstream 114991 2581296 ~ 2581522 (+)
G230817 NA non-coding downstream 465 2697490 ~ 2697760 (+)
G230828 NA non-coding downstream 85911 2782936 ~ 2783757 (+)
G230836 NA non-coding downstream 107003 2804028 ~ 2806618 (+)
G230831 NA non-coding downstream 140132 2837157 ~ 2837639 (+)
G230702 NA non-coding downstream 141072 2838097 ~ 2843148 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 392131 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 969720 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1034948 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1114444 1578022 ~ 1579356 (+)
G229936 NA other upstream 1289383 1397080 ~ 1407130 (+)
G230689 NA other downstream 381477 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 1211426 3848427 ~ 3914231 (+)
G231863 NA other downstream 1710127 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2925990 5608457 ~ 5634804 (+)
G232558 NA other downstream 3296635 5993660 ~ 6041863 (+)

Expression


Co-expression Network