Gene
RNA
| Item | Value |
|---|---|
| gene id | G230828 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 2782936 ~ 2783757 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU261980 | True | 801 | lncRNA | 0.41 | 2 | 2782936 | 2783757 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_02652696_02685815 | CALCR | coding | upstream | 97103 | 2652696 ~ 2685833 (+) |
| CI01000054_02613166_02614884 | TFPI2 | coding | upstream | 167478 | 2613058 ~ 2615458 (+) |
| CI01000054_02589793_02592201 | BET1 | coding | upstream | 190010 | 2589793 ~ 2592926 (+) |
| CI01000054_02564258_02570248 | NA | coding | upstream | 212531 | 2563692 ~ 2570405 (+) |
| CI01000054_02500503_02511195 | SGCE | coding | upstream | 271741 | 2500503 ~ 2511195 (+) |
| CI01000054_02824071_02824355 | NA | coding | downstream | 40268 | 2824025 ~ 2824642 (+) |
| CI01000054_02951289_02967370 | NA | coding | downstream | 167158 | 2950915 ~ 2967660 (+) |
| CI01000054_02975008_02985278 | EFCAB1 | coding | downstream | 190831 | 2974588 ~ 2985335 (+) |
| CI01000054_03016199_03016501 | NA | coding | downstream | 232202 | 3015959 ~ 3016693 (+) |
| CI01000054_03424472_03425704 | NA | coding | downstream | 639297 | 3423054 ~ 3426433 (+) |
| G230817 | NA | non-coding | upstream | 85176 | 2697490 ~ 2697760 (+) |
| G230816 | NA | non-coding | upstream | 85911 | 2696513 ~ 2697025 (+) |
| G230707 | NA | non-coding | upstream | 93721 | 2633291 ~ 2689215 (+) |
| G230812 | NA | non-coding | upstream | 170558 | 2611396 ~ 2612378 (+) |
| G230802 | NA | non-coding | upstream | 195798 | 2586915 ~ 2587138 (+) |
| G230836 | NA | non-coding | downstream | 20271 | 2804028 ~ 2806618 (+) |
| G230831 | NA | non-coding | downstream | 53400 | 2837157 ~ 2837639 (+) |
| G230702 | NA | non-coding | downstream | 54340 | 2838097 ~ 2843148 (+) |
| G230838 | NA | non-coding | downstream | 66057 | 2849814 ~ 2850084 (+) |
| G230839 | NA | non-coding | downstream | 66698 | 2850455 ~ 2851982 (+) |
| CI01000054_02289802_02330591 | SLC25A13 | other | upstream | 478554 | 2289802 ~ 2330981 (+) |
| CI01000054_01725792_01726688 | NA | other | upstream | 1056143 | 1725627 ~ 1726793 (+) |
| CI01000054_01650242_01665628 | PLEKHO1A | other | upstream | 1121371 | 1650242 ~ 1666115 (+) |
| CI01000054_01578022_01579167 | NA | other | upstream | 1200867 | 1578022 ~ 1579356 (+) |
| G229936 | NA | other | upstream | 1375806 | 1397080 ~ 1407130 (+) |
| G230689 | NA | other | downstream | 294745 | 3078502 ~ 3087392 (+) |
| CI01000054_03848427_03914231 | NA | other | downstream | 1124694 | 3848427 ~ 3914231 (+) |
| G231863 | NA | other | downstream | 1623395 | 4407152 ~ 4450730 (+) |
| CI01000054_05608892_05634793 | RNF19B | other | downstream | 2839258 | 5608457 ~ 5634804 (+) |
| G232558 | NA | other | downstream | 3209903 | 5993660 ~ 6041863 (+) |
