G230693


Basic Information

Item Value
gene id G230693
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 2864597 ~ 2866640 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU261839
AGTGTCTGTGCAGCAGCTAAAATGAATGAAAACATTGTGCACATTGATTAGAATATGTATTCATTGTTGATGATTTAGCATATTAGATTATTGTGTATAGAATTTTCCAGCTTAATGATTTTTCTCTGTCTGGGATACATTATAAATTATTTAAATCAGAATGGGAAAACATAGCACAAATGAAATCATGTAAAAATGGTAAAATATAATACAAATAAAATACAATAAAAAGCAACCAAAATAAAATAATAGAATATTTAAAAAGACACTTTTATTGTTGCTCTTCTTTTGAGAACAAGTTTGCCTAATTGATTACAGTTGTTCAAGTCAGCAGTGACACGAGGTGCAGCACCATTAGTTCATCACTGTCCAATCAGATACAAATTTGAATATTACAACTGACAGAATGCCTTTTCGAGCATTACGGTCAACTAAAAAAGACGAAATGTCAATAAATAAGAACAAAATGTATAGGGAGCAAAACATTATGTACCAATGTCCAGCAATTTCAAGCCGTTTCAAAAGGAATTTGCTTAAAATGATATCCGATTACACAAACCAAATTGATTATAAAAATTCCTAACTAAAGAATATCATTTCAAACAACAAAAGACATTTTCTTTAAAACAAAGTTAAACGATCTACAACAGATTTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTCATGGGGAAAAGCACTGAGATGGGTAAATATCAAAGGTGCTATTTTTTTTTTCAGCATCACATCATGCCAAAATTCAAATTCCATCACTAACAAGAACGGGTCGTACATTCGAAAGCCTAACATTTAATACATTTATAATGTTAAAACACTATGAATTATTCACCAGGCCAACCAAGCTAAAGCTAAAAAAACAAACAAATCAGATTAGTTCTATACAAGACCCACAAACATTAAGGCATACAGTTACATTGTTTGATATCTAATGCCCTCTGGATCACCAAATCCAATCACAGACTTATTTGGAGGAGGGTAAAGCTGTGCCAGCGTAACATCAGTACAGTGAAGATTTGAAAAATGGTGGTGTTATTCACCAATGATCAATTGAAATGATTTATTAGACTGATGCAGTGAACTGATCACAGAATCAGAAAATGTTGACAGTACAAAAGTCACCACACAACAGTGATCTAATACATAAAATATAATATTAATATTAATAATAATATTATATAAATAAAAAATAAATGCTGAAATGACCACCTGTATGTTTCATTATCTTTTCCATTAATGGAAATTTAAGTGAATTGTATAAATAACCCAACACTATTGTATCCAGATAGCTGAGACCATAAGTATTACTGGTTAAGCTAAAACCTGAACCCTTGTTGAATCTAAAACTAGTCATAAATAGACCTGAGCATGGAATGTGACAGAATGAGTATACTGATCCTGAGAGAATGAATCAAGCATCAGTGCTTAAAGGGATAGTCCACCCAAAAAGATCATTCTGGCATTATTTACTCACCCTCATGTCGTTCCAAACCTGCATGATTTACTTTCTTCCACTGAACACACACAAAAAAAGATATTCATGTCTCAGTGTTTGTCTTGTCCATATATGGAAGTCAGAAGAAACCTGTTTGGTTAGCAACATTCTTCAGAATATCTTCTTTTGTGTTTCATAAAAAAGGTTTGATACAGCATGAGGGTGAGTACATGATGTGAGGGGTGAACTATCACTTTAACTGTGTGAATGTTTTGTAGTACTACAGTGCCTGCCTATAGCTCCTCATCCCTCATCAAACAGCTTCACCTGGATTCACCAGGCTATATGCTAAATCCTGAAGCAGCGTCCCTCCTTCCTTCCCTCCACTTTTTCATCACATGCTAAACACAAAGGCACTGCGGCTTGGTACATGTTTTGTGATGATCTATCCGGACAATTAAGTGAAATGGGAAATGGAAGGATGTAGCATTGCGTGTATATAAAAAGGACCTGGACTTAAAGGTTTAGTTCACTTCAGAATTCAAATTTCCTCATAATTTATTCACCCCCATGTCATTCAAGATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261839 True 2044 lncRNA 0.33 1 2864597 2866640

Neighbor

gene id symbol gene type direction distance location
CI01000054_02824071_02824355 NA coding upstream 39955 2824025 ~ 2824642 (+)
CI01000054_02652696_02685815 CALCR coding upstream 178764 2652696 ~ 2685833 (+)
CI01000054_02613166_02614884 TFPI2 coding upstream 249139 2613058 ~ 2615458 (+)
CI01000054_02589793_02592201 BET1 coding upstream 271671 2589793 ~ 2592926 (+)
CI01000054_02564258_02570248 NA coding upstream 294192 2563692 ~ 2570405 (+)
CI01000054_02951289_02967370 NA coding downstream 84275 2950915 ~ 2967660 (+)
CI01000054_02975008_02985278 EFCAB1 coding downstream 107948 2974588 ~ 2985335 (+)
CI01000054_03016199_03016501 NA coding downstream 149319 3015959 ~ 3016693 (+)
CI01000054_03424472_03425704 NA coding downstream 556414 3423054 ~ 3426433 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 692342 3558982 ~ 3663042 (+)
G230839 NA non-coding upstream 12615 2850455 ~ 2851982 (+)
G230838 NA non-coding upstream 14513 2849814 ~ 2850084 (+)
G230702 NA non-coding upstream 21449 2838097 ~ 2843148 (+)
G230831 NA non-coding upstream 26958 2837157 ~ 2837639 (+)
G230836 NA non-coding upstream 57979 2804028 ~ 2806618 (+)
G230695 NA non-coding downstream 44316 2910956 ~ 2913576 (+)
G230705 NA non-coding downstream 67268 2933908 ~ 2964009 (+)
G230697 NA non-coding downstream 122369 2989009 ~ 3000019 (+)
G230700 NA non-coding downstream 134555 3001195 ~ 3003117 (+)
G230856 NA non-coding downstream 190224 3056864 ~ 3057219 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 560215 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1137804 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1203032 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1282528 1578022 ~ 1579356 (+)
G229936 NA other upstream 1457467 1397080 ~ 1407130 (+)
G230689 NA other downstream 211862 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 1041811 3848427 ~ 3914231 (+)
G231863 NA other downstream 1540512 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2756375 5608457 ~ 5634804 (+)
G232558 NA other downstream 3127020 5993660 ~ 6041863 (+)

Expression


Co-expression Network