G231015


Basic Information

Item Value
gene id G231015
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3139393 ~ 3139663 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU262190
CCCGAAGACCATGGGCATCCAATAAAGGTCTTCGGCCTTGTCCCTTACACACAGAGATTTCTCCAGTTTCTCTGAATCTTTTGATGATGTTATGCACTGTAGATGATGAGATTTGCAAAGCCTTTGCAATTTGACGTTGAGGAACATTGTTTTTAAAGTATTCCACAATCTTTTTACGCACTCTTTCACAGCTCTGCCCATCTTTACTTCTGAGAGACTCTGCCTCTCTTAGACATCCCTTTTATAGCTAATCATGTTACAGACCTGATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262190 True 271 lncRNA 0.41 1 3139393 3139663

Neighbor

gene id symbol gene type direction distance location
CI01000054_03016199_03016501 NA coding upstream 122700 3015959 ~ 3016693 (+)
CI01000054_02975008_02985278 EFCAB1 coding upstream 154058 2974588 ~ 2985335 (+)
CI01000054_02951289_02967370 NA coding upstream 171733 2950915 ~ 2967660 (+)
CI01000054_02824071_02824355 NA coding upstream 314751 2824025 ~ 2824642 (+)
CI01000054_02652696_02685815 CALCR coding upstream 453560 2652696 ~ 2685833 (+)
CI01000054_03424472_03425704 NA coding downstream 283391 3423054 ~ 3426433 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 419319 3558982 ~ 3663042 (+)
CI01000054_03670684_03671857 NA coding downstream 531021 3670684 ~ 3672003 (+)
CI01000054_03707961_03761024 ADGRB2 coding downstream 568172 3707835 ~ 3761112 (+)
CI01000054_03848427_03914231 NA coding downstream 708764 3848427 ~ 3914231 (+)
G230856 NA non-coding upstream 82174 3056864 ~ 3057219 (+)
G230700 NA non-coding upstream 136276 3001195 ~ 3003117 (+)
G230697 NA non-coding upstream 139374 2989009 ~ 3000019 (+)
G230705 NA non-coding upstream 175384 2933908 ~ 2964009 (+)
G230695 NA non-coding upstream 225817 2910956 ~ 2913576 (+)
G231209 NA non-coding downstream 219608 3359271 ~ 3359533 (+)
G231270 NA non-coding downstream 265554 3405217 ~ 3405519 (+)
G231273 NA non-coding downstream 270936 3410599 ~ 3410925 (+)
G231286 NA non-coding downstream 293645 3433308 ~ 3433582 (+)
G231293 NA non-coding downstream 310117 3449780 ~ 3450241 (+)
G230689 NA other upstream 52001 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 835011 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1412600 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1477828 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1557324 1578022 ~ 1579356 (+)
G231863 NA other downstream 1267489 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2483352 5608457 ~ 5634804 (+)
G232558 NA other downstream 2853997 5993660 ~ 6041863 (+)
CI01000054_06305908_06312122 NA other downstream 3164644 6305908 ~ 6312163 (+)

Expression


Co-expression Network