G231270


Basic Information

Item Value
gene id G231270
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3405217 ~ 3405519 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU262455
GCACATTTACAGTAAAACGTGGACAAATACATTCATGAAACATTTCTGTTTTTGTTCATAATTTACGCCGAAATTTGTTCTGCTCTAGTGTCATGAATGATGAAGAGTCTGGTCAGATGTGTGTACTTTTGCCTGTGTTTGACTGGTTGTGTTACTATTCATAGCAATGCAATTTATTCCATGCTTTTTATGATCATAGATCTGCTTAACCACAACATTGCCGTGGGTGTTAATCATATAACATGATTTGCTATTTCTACCGAACTTCAAACAGACGTGCACATACAGCCCACTCCGATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262455 True 303 lncRNA 0.37 1 3405217 3405519

Neighbor

gene id symbol gene type direction distance location
CI01000054_03016199_03016501 NA coding upstream 388524 3015959 ~ 3016693 (+)
CI01000054_02975008_02985278 EFCAB1 coding upstream 419882 2974588 ~ 2985335 (+)
CI01000054_02951289_02967370 NA coding upstream 437557 2950915 ~ 2967660 (+)
CI01000054_02824071_02824355 NA coding upstream 580575 2824025 ~ 2824642 (+)
CI01000054_02652696_02685815 CALCR coding upstream 719384 2652696 ~ 2685833 (+)
CI01000054_03424472_03425704 NA coding downstream 17535 3423054 ~ 3426433 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 153463 3558982 ~ 3663042 (+)
CI01000054_03670684_03671857 NA coding downstream 265165 3670684 ~ 3672003 (+)
CI01000054_03707961_03761024 ADGRB2 coding downstream 302316 3707835 ~ 3761112 (+)
CI01000054_03848427_03914231 NA coding downstream 442908 3848427 ~ 3914231 (+)
G231209 NA non-coding upstream 45684 3359271 ~ 3359533 (+)
G231015 NA non-coding upstream 265554 3139393 ~ 3139663 (+)
G230856 NA non-coding upstream 347998 3056864 ~ 3057219 (+)
G230700 NA non-coding upstream 402100 3001195 ~ 3003117 (+)
G230697 NA non-coding upstream 405198 2989009 ~ 3000019 (+)
G231273 NA non-coding downstream 5080 3410599 ~ 3410925 (+)
G231286 NA non-coding downstream 27789 3433308 ~ 3433582 (+)
G231293 NA non-coding downstream 44261 3449780 ~ 3450241 (+)
G231294 NA non-coding downstream 45872 3451391 ~ 3451658 (+)
G231295 NA non-coding downstream 46812 3452331 ~ 3452550 (+)
G230689 NA other upstream 317825 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 1100835 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1678424 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1743652 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1823148 1578022 ~ 1579356 (+)
G231863 NA other downstream 1001633 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2217496 5608457 ~ 5634804 (+)
G232558 NA other downstream 2588141 5993660 ~ 6041863 (+)
CI01000054_06305908_06312122 NA other downstream 2898788 6305908 ~ 6312163 (+)

Expression


Co-expression Network