G231286


Basic Information

Item Value
gene id G231286
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3433308 ~ 3433582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU262471
CTCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGATCTTGAGAGAGGAAATGTCATTGCTGGCTATGTAGGCCTCACTGAGCCATCAGATTTCAACAAAAATATCTTAATTTGTGTTCCGAAGATGAATGAAGGTCTTACGGGTGTGGAACGGCATGAGGTTGAGTAATAAATTACATTATTTTCATTTTTGGGTGAACTAACCCTTTAACATTTGCCAAAAATAGAACTTTTTTGTTGTTGTTAAAAAACGAACAAGCAAGCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262471 True 275 lncRNA 0.35 1 3433308 3433582

Neighbor

gene id symbol gene type direction distance location
CI01000054_03424472_03425704 NA coding upstream 6875 3423054 ~ 3426433 (+)
CI01000054_03016199_03016501 NA coding upstream 416615 3015959 ~ 3016693 (+)
CI01000054_02975008_02985278 EFCAB1 coding upstream 447973 2974588 ~ 2985335 (+)
CI01000054_02951289_02967370 NA coding upstream 465648 2950915 ~ 2967660 (+)
CI01000054_02824071_02824355 NA coding upstream 608666 2824025 ~ 2824642 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 125400 3558982 ~ 3663042 (+)
CI01000054_03670684_03671857 NA coding downstream 237102 3670684 ~ 3672003 (+)
CI01000054_03707961_03761024 ADGRB2 coding downstream 274253 3707835 ~ 3761112 (+)
CI01000054_03848427_03914231 NA coding downstream 414845 3848427 ~ 3914231 (+)
CI01000054_03955331_03962388 NA coding downstream 521749 3955331 ~ 3962395 (+)
G231273 NA non-coding upstream 22383 3410599 ~ 3410925 (+)
G231270 NA non-coding upstream 27789 3405217 ~ 3405519 (+)
G231209 NA non-coding upstream 73775 3359271 ~ 3359533 (+)
G231015 NA non-coding upstream 293645 3139393 ~ 3139663 (+)
G230856 NA non-coding upstream 376089 3056864 ~ 3057219 (+)
G231293 NA non-coding downstream 16198 3449780 ~ 3450241 (+)
G231294 NA non-coding downstream 17809 3451391 ~ 3451658 (+)
G231295 NA non-coding downstream 18749 3452331 ~ 3452550 (+)
G231350 NA non-coding downstream 398720 3832302 ~ 3832605 (+)
G231353 NA non-coding downstream 481267 3914849 ~ 3916392 (+)
G230689 NA other upstream 345916 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 1128926 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1706515 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1771743 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1851239 1578022 ~ 1579356 (+)
G231863 NA other downstream 973570 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2189433 5608457 ~ 5634804 (+)
G232558 NA other downstream 2560078 5993660 ~ 6041863 (+)
CI01000054_06305908_06312122 NA other downstream 2870725 6305908 ~ 6312163 (+)

Expression


Co-expression Network