G231543



Basic Information


Item Value
gene id G231543
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3655425 ~ 3659900 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU262779
GGCGAAGCTCGGAGGACCCCAGTAAGCAACTCCATTAGCGTCCAGCAAACAACGACGACTAGCAGATCCAGTGGCATTTGATGGACACTTGTTGTATACCGTCTCTCCAGCTGAGGCTCTCTTCCACGTCATGGCTACTTGGTACTCATCTTTACATATTTCATGAGGTGCTGGGCACTTCTTGTCATTGCAGGAGCGCACTTCCTCTCCAGAGCCATCGCAAGGGTAACCCTGGATTCCTGTGCCTTCACACATACGGAACCGACGCTGCCAACCGGAGTCACAGGTCTTGGAGCACAAGCTCCAGTGATTCCAAGCACCCCAGTTCCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU262779 True 330 lncRNA 0.54 3 3655425 3659900

Neighbor


gene id symbol gene type direction distance location
CI01000054_03485424_03500327 NA coding downstream 154936 3484828 ~ 3500489 (-)
CI01000054_03082593_03087260 SFPQ coding downstream 567880 3082348 ~ 3087545 (-)
CI01000054_03049995_03054032 NA coding downstream 601393 3049864 ~ 3054032 (-)
CI01000054_03032517_03047094 ZMYM4 coding downstream 608331 3031826 ~ 3047094 (-)
CI01000054_03018229_03030984 NA coding downstream 624441 3018076 ~ 3030984 (-)
CI01000054_03918853_03925416 NA coding upstream 258498 3918398 ~ 3925416 (-)
CI01000054_03964701_03964965 NA coding upstream 304790 3964690 ~ 3964965 (-)
CI01000054_03998494_04025965 NA coding upstream 338518 3998418 ~ 4026082 (-)
CI01000054_04067809_04076131 NA coding upstream 407899 4067799 ~ 4076762 (-)
CI01000054_04210959_04214380 NXPH1, NXPH4 coding upstream 549940 4209840 ~ 4214380 (-)
G231496 NA non-coding downstream 81540 3520949 ~ 3573885 (-)
G231475 NA non-coding downstream 201694 3453509 ~ 3453731 (-)
G231453 NA non-coding downstream 204973 3450100 ~ 3450452 (-)
G231257 NA non-coding downstream 260058 3394687 ~ 3395367 (-)
G231241 NA non-coding downstream 272424 3382253 ~ 3383001 (-)
G231544 NA non-coding upstream 2959 3662859 ~ 3708165 (-)
G231560 NA non-coding upstream 52345 3712245 ~ 3712718 (-)
G231573 NA non-coding upstream 119732 3779632 ~ 3783260 (-)
G231593 NA non-coding upstream 125118 3785018 ~ 3785222 (-)
G231594 NA non-coding upstream 125432 3785332 ~ 3785801 (-)
G230908 NA other downstream 592082 3057648 ~ 3063343 (-)
CI01000054_02857402_02860451 NA other downstream 794852 2857402 ~ 2860573 (-)
G230923 NA other downstream 817743 2837237 ~ 2837682 (-)
G230178 NA other downstream 2425290 1185533 ~ 1230135 (-)
G231645 NA other upstream 321947 3981847 ~ 3982823 (-)
CI01000054_04671351_04681181 PEF1 other upstream 1010251 4670151 ~ 4681361 (-)
G232274 NA other upstream 1546299 5206199 ~ 5209240 (-)
CI01000054_06629482_06641861 TRIQK other upstream 2968182 6628082 ~ 6642160 (-)
CI01000054_07165957_07169539 HEYL other upstream 3505535 7165435 ~ 7169539 (-)

Expression



Co-expression Network