XLOC_009913 (BX539313.2)


Basic Information

Item Value
gene id XLOC_009913
gene name BX539313.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 24905556 ~ 24918957 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019780
TAGCAGAAATGTTTGTGTTTATTGCAAAACTGCTGATTTTCAGCTCAGTTATTACATCGGCTTTCACTTGCTATCAATGTTTCATTGATGAAAATGACAGTCGTCGTTTGTGTTTGGGTCATATTCTTACCGAATACAATGTAAGGAATGTAGACTCTTGTTACAAAACATTGGATCGCATATTCAACAATGAAGAGAAAGTCATAGAGGCTGGTAAAGTAGGGAGAGGATATGACTTGACGCTGAAGAATATTTTGATGGCTGAGATTATGCCTATAGTAGAGGAATTTGACCAGCAGCTAAATTACGATACAGAGTATGAGTCCAGGTTACAGGCAGCAGCAAACAATTTCATTGCAGCGGCCTCAAGCCTGCCCAGAGGATTCATCTTTACTGTTTAGGTTTCCAGGTGCAGGGTGCTGTTTATAACTGCGTGACCTGTCAGTATGACTCCTGTGAGTTCCCGCTGGACTGTCCCGGGAAGGAAATCACTGTACAAGAGAACAACAGGACTCAGATGTGGTGTAGCGTCCCTTTCCTGCTGCCTGCAGATGTAGAGATAGTCTGGAGATACGCACAGGACAGAACGATGCTGAGGGAGCGTTTTGATGATGTGACAGTTGGAGTAGATCCTTTATACTCCATTCCCTCTGCCCGTCCTGAGCAATCTGGAACCTACCAGTGTGAAGTGCTTTCTCAGGAGCAATCACTCGTCCGGCTTTACTTCTACCTCACAGTGGTTCCTGTGGCACAGACTTATCATGTCCACCTGCAGGATCTCTGTGCTCAGGCTCTTCGTCCAGAACCCCAGTTTCCTCCTTCGTTCAGCTTCTGGTTGCCCAGGCCTGCCCTCCTCATCACCTGCCTGACCGCAACCATGCTGCTGATTTTCCTCAGTCTGGGAGCGATGTGTCGGTTATGGTATCAGATTAGGACCAACGTTTCTAATCCAGCCTAAGAAACAATATTGACAGAAAAGAAGAAATACTTGATTCACTGCTAAACACAGTGTTTCAACAATAAATGCATTTCTAATTAAAACTGAATGGACTATTCAGAATTAATCTCTTCAAATACTATTAAACAGAAATGAGCTTTTGAAGACTTCTGGGAGAAAATGTAAGAGGCAGTGAATCTGAGCGCATGAATGCGACTTCACCACTACGTTCAGTTATAAAGGCTTCTTTATGCTACTAAATATAGCCAGACATGACTCAGGGCGTAACTCCTTTTACAGTTTTTACTCAGTGTTTTGATGCTGTTGTCCCAACAACCCATTAAGTCAAATCTGGGCGAGGAAAATGCTTTATTGTACAGAACTGCAATTTTCCATAATGTTTGTTAGGACAATGTGTATTTTAGAGCTACAAACTTTATTACAATGTCTGGATTTTATCACAGTGCTTAAGATTTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097454

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019780 True 1415 processed_transcript 0.43 8 24905556 24918957

Neighbor

gene id symbol gene type direction distance location
XLOC_009912 dre-mir-125a-1 coding upstream 7303 24898171 ~ 24898253 (+)
XLOC_009910 NA coding upstream 8445 24834775 ~ 24897111 (+)
XLOC_009911 dre-let-7d-1 coding upstream 24338 24881122 ~ 24881218 (+)
XLOC_009909 si:dkey-79d12.4 coding upstream 164156 24733741 ~ 24741400 (+)
XLOC_009908 smg9 coding upstream 172235 24721556 ~ 24733321 (+)
XLOC_009914 fpr1 coding downstream 52760 24971717 ~ 24974700 (+)
XLOC_009915 si:dkeyp-84f3.5 coding downstream 59246 24978203 ~ 24992830 (+)
XLOC_009916 znf1035 coding downstream 93037 25011994 ~ 25038855 (+)
XLOC_009917 im:7147486 coding downstream 147923 25066880 ~ 25072830 (+)
XLOC_009918 si:dkeyp-84f3.9 coding downstream 155072 25074029 ~ 25080476 (+)
XLOC_009905 NA non-coding upstream 331755 24565734 ~ 24573801 (+)
XLOC_009904 CT867948.1 non-coding upstream 381480 24516092 ~ 24524076 (+)
XLOC_009929 NA non-coding downstream 288661 25207618 ~ 25213978 (+)
XLOC_009930 NA non-coding downstream 300478 25219435 ~ 25242310 (+)
XLOC_009931 NA non-coding downstream 314996 25233953 ~ 25235093 (+)
XLOC_009937 dre-mir-30d non-coding downstream 422459 25341416 ~ 25341543 (+)
XLOC_009938 dre-mir-30b non-coding downstream 422767 25341724 ~ 25341811 (+)

Expression


Co-expression Network