Gene
RNA
| Item | Value |
|---|---|
| gene id | G231684 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 4024491 ~ 4089465 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU262928 | True | 200 | lncRNA | 0.37 | 2 | 4024491 | 4089465 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_03964701_03964965 | NA | coding | downstream | 59526 | 3964690 ~ 3964965 (-) |
| CI01000054_03918853_03925416 | NA | coding | downstream | 99075 | 3918398 ~ 3925416 (-) |
| CI01000054_03485424_03500327 | NA | coding | downstream | 524002 | 3484828 ~ 3500489 (-) |
| CI01000054_03082593_03087260 | SFPQ | coding | downstream | 936946 | 3082348 ~ 3087545 (-) |
| CI01000054_03049995_03054032 | NA | coding | downstream | 970459 | 3049864 ~ 3054032 (-) |
| CI01000054_04210959_04214380 | NXPH1, NXPH4 | coding | upstream | 120375 | 4209840 ~ 4214380 (-) |
| CI01000054_04264074_04331270 | THSD7AA, THSD7A | coding | upstream | 174397 | 4263862 ~ 4331270 (-) |
| CI01000054_04411682_04448848 | NA | coding | upstream | 321964 | 4411429 ~ 4448848 (-) |
| CI01000054_04463229_04486856 | DLGAP3 | coding | upstream | 373423 | 4462888 ~ 4486856 (-) |
| CI01000054_04671351_04681181 | PEF1 | coding | upstream | 581509 | 4670151 ~ 4681361 (-) |
| G231658 | NA | non-coding | downstream | 56471 | 3967727 ~ 3968020 (-) |
| G231613 | NA | non-coding | downstream | 110928 | 3908451 ~ 3913563 (-) |
| G231615 | NA | non-coding | downstream | 132550 | 3890968 ~ 3891941 (-) |
| G231600 | NA | non-coding | downstream | 217323 | 3806962 ~ 3807168 (-) |
| G231597 | NA | non-coding | downstream | 233104 | 3791164 ~ 3791387 (-) |
| G231694 | NA | non-coding | upstream | 3462 | 4092927 ~ 4093128 (-) |
| G231699 | NA | non-coding | upstream | 6801 | 4096266 ~ 4096985 (-) |
| G231747 | NA | non-coding | upstream | 58895 | 4148360 ~ 4148564 (-) |
| G231940 | NA | non-coding | upstream | 124917 | 4214382 ~ 4215336 (-) |
| G231991 | NA | non-coding | upstream | 306512 | 4395977 ~ 4396286 (-) |
| G231645 | NA | other | downstream | 41668 | 3981847 ~ 3982823 (-) |
| G230908 | NA | other | downstream | 961148 | 3057648 ~ 3063343 (-) |
| CI01000054_02857402_02860451 | NA | other | downstream | 1163918 | 2857402 ~ 2860573 (-) |
| G230923 | NA | other | downstream | 1186809 | 2837237 ~ 2837682 (-) |
| G230178 | NA | other | downstream | 2794356 | 1185533 ~ 1230135 (-) |
| G232274 | NA | other | upstream | 1116734 | 5206199 ~ 5209240 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | upstream | 2538617 | 6628082 ~ 6642160 (-) |
| CI01000054_07165957_07169539 | HEYL | other | upstream | 3075970 | 7165435 ~ 7169539 (-) |
| G235216 | NA | other | upstream | 5158574 | 9248039 ~ 9248538 (-) |
