G232077


Basic Information

Item Value
gene id G232077
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 4836279 ~ 4836518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU263349
TCCAATCAGAATTTAGTCTCTTAACTGTGTTTTATAATTCTTAAAGTCCCCCTGTAGTCAATAATTTTATCCCTTAAAACTCATCTTTGATCACCAAAATTACATATTTAAACGTTTTTTCCTATTTTAAAAAAATCTTAATGCCTTAAAATAGCTTGAATGTAACCCTACACCCTTGCCTCAATTAATATACGCGGATCTATGAATATGATAATAAGCCCCGCCTTCACTCACTCGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263349 True 240 lncRNA 0.33 1 4836279 4836518

Neighbor

gene id symbol gene type direction distance location
CI01000054_04658039_04659082 NA coding upstream 176578 4657991 ~ 4659701 (+)
CI01000054_04453321_04456780 ILF2, ILF2.L coding upstream 379171 4453321 ~ 4457108 (+)
CI01000054_04372172_04374454 NA coding upstream 461378 4371425 ~ 4374901 (+)
CI01000054_04248925_04249335 NA coding upstream 586692 4248359 ~ 4249587 (+)
CI01000054_03955331_03962388 NA coding upstream 873884 3955331 ~ 3962395 (+)
CI01000054_04924205_04945546 NA coding downstream 87641 4924159 ~ 4945841 (+)
CI01000054_04962081_04977729 NA coding downstream 125412 4961930 ~ 4977937 (+)
CI01000054_05145255_05217807 CSMD2 coding downstream 308593 5145111 ~ 5217811 (+)
CI01000054_05402279_05408977 TRAPPC3.S, TRAPPC3, TPPC3 coding downstream 564929 5401447 ~ 5409085 (+)
CI01000054_05409518_05413525 NA coding downstream 572784 5409302 ~ 5413987 (+)
G232052 NA non-coding upstream 59292 4776670 ~ 4776987 (+)
G232050 NA non-coding upstream 63300 4772738 ~ 4772979 (+)
G232048 NA non-coding upstream 76062 4759983 ~ 4760217 (+)
G232042 NA non-coding upstream 100499 4735397 ~ 4735780 (+)
G232014 NA non-coding upstream 151126 4682432 ~ 4685153 (+)
G232094 NA non-coding downstream 56239 4892757 ~ 4893042 (+)
G232116 NA non-coding downstream 265708 5102226 ~ 5181459 (+)
G232293 NA non-coding downstream 423478 5259996 ~ 5260762 (+)
G232368 NA non-coding downstream 520723 5357241 ~ 5357672 (+)
G232379 NA non-coding downstream 563850 5400368 ~ 5401112 (+)
G231863 NA other upstream 385549 4407152 ~ 4450730 (+)
CI01000054_03848427_03914231 NA other upstream 922733 3848427 ~ 3914231 (+)
G230689 NA other upstream 1748887 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 2531897 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 3109486 1725627 ~ 1726793 (+)
CI01000054_05608892_05634793 RNF19B other downstream 786497 5608457 ~ 5634804 (+)
G232558 NA other downstream 1157142 5993660 ~ 6041863 (+)
CI01000054_06305908_06312122 NA other downstream 1467789 6305908 ~ 6312163 (+)
G232659 NA other downstream 1538332 6374850 ~ 6375894 (+)
G232870 NA other downstream 2051394 6887912 ~ 6888503 (+)

Expression


Co-expression Network