G232147


Basic Information

Item Value
gene id G232147
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 4923922 ~ 5139595 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU263421
CAGTGTACTGCAGAACAAATCCATTGCTGCTAAGTGAGGCGTCACTGCGGAAGGCCAGGAACAGTGTGTTGGAGCTGCTCTCAATGCGCTCAGGGACGTCGGTGCCATAAAAGCTGCCCAGCAGCGGGCAGAGAGAATCAGGCCCATCATAGACATGCAGGAAGTCGTAGCTCGGCTCTAGACTAAAGTGATTGAAAGTGAGTGATATGATGTGGTCCGGCGTTACTGTTACTGTCCAGTCACATTCTCTGCCATGAGGATAGGGTTCTGGGTATTCAGGGGACAGGATCAGTCCACTGGGACCAGTCAGATTCCCTCCACATGGAGCAGAACAGGTGGGCGGATCAGGCTGCCAGAAGAAACGGTTGTTGATCTCGGTACAGGTGATCTTGGTCGCCCCCTGTAGGAGGTATCCGGGATCGCATTGGAACAGCACATGATCCCCTGGCTCTCTGCTGTCTCCTATGCGAGTGCCATTCGTTGGAATGCCAGGATCATTACAGGAAGTGGCAGTTGAAACCGAGAACTGCAGAGCGAAACCCTGCTTGCTGGTAAAGAAGTCAGTTGTAAACTGCAGACTGACAGAGTTAAAGGTGCTGTGGAGGTCTGGAGGAAGTGTAGAGCCACTCAGCTCTCTCAGGAGCACACCTCCGTCCTGAGGCCCATCCCAGATCCGCAAAACATCGTGCACCTCTTCTGTGTAAAAGACCAGGAAATGCAACCCGATGGTGCTTCCAAGTGCCGCCTCAATAGTCCAGACACAGTGCAAGTTATGCTCATAAGGCGCTGGGTAACCAGGAGACAGAATCCGGCCCATGGGCTCATCTTTAATCGTTCCTCCACACTCGGCCACACACAGTGGAAGGGGGCTGTCCCATGCTCTCCTCTCCCCTCTGAGACATGTCAAAACCTCCGGGCCCTTTAAACTGTAGCCAGGATCACAGCTATATGACACCGTGCTGCCTGCGAAGTGACCTTTGTCCTCCCGTTTAAAGCCAAACTGAGGCACACCTGGGTCCTCACATTTCACCAACTCAAAACTGGTGAAGTGCAGCTCAAAACCTTTGCTGGTATTGTCACTATTACTAATGAACTCTAGCCACATGGTGCTGGACGTGCTGTTTAAAGTGACATCCATCAGCTCTGTGCCTGTGAATATTCCCAGCAGTCGAGCACTGTTACTGTTACCATCATACACCTTAAGCATGTCATCCTCCTCCAGGCGGAAATCCCGTGCTCGGAGCTGGATGCCTTTACCGGGTTGGGTTTGGATGGAGTAGATGCACTCATGATTGTTACCGTAATAACCAGGGTAGTTTGGAGAGAGTAAAACTCCTTGTTTCCCAGTTACAGATGATCCGCATTCAGCAACACACCTTGGCAGAGGGGAACTCCACACCCGCCGACGCCCCCCTAGACACACCACCCTCGCTGGCCCCTCGAGACGATACCCCGGAAAACAGGAGAAGATAAGCGCATCCCCCACCCCGAACTGCAGCCCTTTACGAGTGCTGAAGGGGGGGACGCCGGGATCTTCACAAGGCTCAAGATCGTATTCTGAGAAAGTGATGTTAAAGCCCTCATAGGACACAGAGAAGTCTGAGAGGAAACGGATCTGAGCGGTGTAGTTGCCAAAGAGTCCAGCGCTAAGAGGGGGCGGCAGCGTAGACCCGGTCAATCTCCACAGGGGTTGAGAGAAACTACCATTTTCTGTGACTAAAAGGTGGTCGTGCGGACTCTCCAAGTGAAAGGTGTGGAAGGTAAACTGGACACCTTTACCATGTGAAGTCTCAATCATCCAGGTACAGTTGAGGTTATGGGGGTAGAAGTCAGGAAACCCAGGGGACAGAATAGTGCCGCTGTTCCCCTGAATAAACCCTCCACATAGTGCATCACAGCTGGGCAGGGGGCGACTCCACTGGAAGTTGGGTTCACACTCGAGGGGCTCGTGGTCACTGAGGGTGTATCCTGCTTCGCAACTAAATGTCACCAATGCTCCCACGTAAAAATCATTGCCATGACGCTGACCGTTGACTGGGATTCCAGGATCAACGCAATGGTCCGACTGGAGTTGCAAGGTCTCATATCGGATGCGGAAGCCGATGTCGGAGTGGCTCTTGTCGGTGGTGAAGAGCAGGTAGAGGAAATTTGAGGTGCTGATGAGGAACTGAGGGACCTGTGTACCCTGGTAACTGCCAATCAGAGGTGAAGAAGGATAACGTCCGTCCCGTACCTCGAGAACATCATAGTTAACCTCTGTCCGGAATTTGTCAAAGATGATCTTAATAGGATATCCTGGTGGGGCCTCGATGATCCACTCACAATTGAGAGCCTCTTTATAAAGCTCAGGCCAGCCTGGGGACAGAATGATGCCGCTAGAAGCCTTCAGGTTTCCACCACATGGAGCTTCACAACGTGGCACAGCGTTGTCCCACACAACATTCCCATCTTTGAGAATGCAGGAGATAGTCTGAGATCCGTGGGTCTTCATGAACCCCTCCTCACACAGGAAAGAGATGGAGCTGCCAAGCTGTAGACTCTCACCAAAGCGCTTTCCGTTTACTGGAACGCCAGGGTCGGGACATTCGTTGTGCCGAAACGTGGTGAAAGTGATGTTGAAGCCACGGTCTGTATACGTATGATCGGTCAGAAATTCCAGTCGGGCCACATGGCCGCTGGTAGTGATGGGTGAGGGCAGCACATCTCCAGAAAAGGTGCCAAGAATTGGCGACTCTGCCTTGCCGCCATCTTTAATGGACAGGAAGTCAAATTGTTTCTCCATGCTCAGGTCGTTAAAGGCTAAGTTGATGCGGCTTTCGGGTTTGGCGATGATCAACCACACACAGTGCATGTTGTTGCCGTACTCCTGAGGGTAGTTTGGTGATAGCAGGACCCCAGATGGAGTTGTGAAGTTGAAGAAACATGAAAACACACAGCTTGGCTTCTTGGCTGACCATTGATTATTTTTCTGGCAGGTAATGTTCTTTTTTCCCACCAACTCAAAGGCTGGAAGGCATTCAAAATATAGTTTGTCTCCATGTCGGAAGCCTGTGCCTTCCCTCTTGCCATAGGCTGGGATTCCAGGGTCTCCACACCCACCCTGGTCAATTTCTTCATAAGAAACCTTAAAGCCCAGGGAGCCACTCGTGTCGTCCGTTTTAAAATTGAGCCACATCTGATGGCTGGTACTGACCACCAGATCTGGAGTTGTAGTCCCAGACAACACATGAAAGACTGTCCGCTGATCGCCGATTACAGTGCCGTCACCCACAGTTAGAGTATCGTAGCCCCGCTCCAAGTCAAACTCTTCAAAAGTCAGCTTGATCACCTTGGAAGGGTCCGAAGCTGTGATGATCCAGGTACAGTTAGCATTGTTGTCATATTGTACTGGGAAATTCGGGGAGGTGATGATGCCACTAGGGCCACGGAGCTGACCACCACACATAGGAGCTCTACAGATAGGCCGGTCATCGCTCCAGCCAACATAACTGTCTGTAACTCGCAGGCAGGTGATGCTTTTAGACCCCTGAAGCTCATATCCTTCATCACAAGAAAAGTGCACAGTAGCACCCCGCCTGAAATCAGAGCCTTTTCTTTTGCCCCTCTCTGGGATTCCTGGATCTGGACACATGTTGTGTCCTTGTGCCACCCCCATCTGAGATAAAACTGATATCTTGCTGTGGTTGTCTTTACTTGGCAGCATCTTCACCCCTCTGGACTTCAGCTCTGTCATCTTCTTCACTTGATACTGAGCACTGAAGCCTCTCAGTTTGTGGTTTCCATCGGATGTGAAGTGGAGTCTCAGCCAATTCTTGCTGCTGATGATGGGCGATGGCAGGTTTGGACCAGTAAACCACTGAGAGGATCCTTCTGTGCCGGTTATCTCCAGAACATCGTAGTCTTCTTCCAATTGAAAGTCGGAGAAGACCAGGGCGATGGTGTCACCTGGTTCGGCTAGCACTGTCCAGGTGCAGTCTGCGTTGTTGTTGTACTCCTGGGGGTAATTTGGACTAGTGATGACACCGCTTTGACCCCGCAGTGTGCCGCCACAGCCATCATCCGCTCGGCAGTACGGCAGGGGGAAGTCCCAGGCAGCGGTGCCGGAAGAAGTGGCCAGGCAGGACAGCACGGTGTGGCCCTCCAGCACATAACCCAGGTTGCAGCTGTAGCGGATCTTGTCCCCGATGTTGAAAGTAGAGCCTTGCTGCATGCCGTTGAGCAGCTGGCCTGGATTTCCACAGGTGTAGCTTGGAAGGGCTTCGTACACGGCTTTGAAGCCCTGGCCACTTACAGCGTAGTCTGACAGCAGCCATAGTGTGAGTCTGGGTCCTGTGCTGACTATAGGGGCAGGAAGTTGAAACCCCGTCAACCGTGTCCGTAAATTTGTTGGACTGGGTTGCCCATCGTAGACTGAAAGGATGTCAAAGTCCTCCTCTAAGGCAAAGCCTTGAAATACCAACTGTATCCGGTTGTGTTCCTGTGCCACAATCACCCATGTGCAGTTGGCGTAGTTGGGATATCCATACGGGTATCCGGGGCTTTCTATTGTCCCATTTGGACTGTGTAGTGTGTGACTGCAGTTTTGAGCCTTAACCGATGCAGCCAGCAGCCCCATATAGAAGAACAGCACCCCGCTCCAGTGATGCGCCTGTACTCCCACCTTCATTAGCGCAAAAATCCTTATACCATCCAGTTTCCTCGTCCCGTTAAATGTACATCTGCACTCTGTCCTCACGAGTCCCGTTCTGTCAGGATTAAAAGAGGCGCTCATGGTGGGCTTTTTTTTGGCAGGCACGGTTATCAGATGGTTTTAAAAGGAAGATTCACTTGGTGTCGGCGCTGAGAAAAATCCCAGTGCATGGAGACTGGACCCTCGCAGCTGGACTGAACCATCTCAAGCGAGCCGCGGGGTGAGCCGATTCTAATAGACGCGTTCTCTCCTAAAAGCTGACGAGCTGGTAATGAGAACTGTATCTGGTCTCTTCGAGCTCACATGAACGTTACAAACGGATAAAGTCTGGAGCCGATTCAAACGGATGATGCGACATACGCCT
>TU263425
CGCTGAATCAATTTGAGGACTTCAATGTTCAGGACATTAGATACAGACCTGAAATGAAATTTTCGTTCCATTCGGTGTGCTTTAAACAAGTTTTGGGACACTTAAGTAAATCCAAAGTTCACGCACACATTTCACACAGTTCAAACTGTTAGGAAAGTAATGTTGGCTAGCAATTCCAAGAGATATGATCTGGCATTTACACACACAGAATAATAAAGTGTCCTGTATTTACCGTGTCCGTAAATTTGTTGGACTGGGTTGCCCATCGTAGACTGAAAGGATGTCAAAGTCCTCCTCTAAGGCAAAGCCTTGAAATACCAACTGTATCCGGTTGTGTTCCTGTGCCACAATCACCCATGTGCAGTTGGCGTAGTTGGGATATCCATACGGGTATCCGGGGCTTTCTATTGTCCCATTTGGACTGTGTAGTGTGTGACTGCAGTTTTGAGCCTTAACCGATGCAGCCAGCAGCCCCATATAGAAGAACAGCACCCCGCTCCAGTGATGCGCCTGTACTCCCACCTTCATTAGCGCAAAAATCCTTATACCATCCAGTTTCCTCGTCCCGTTAAATGTACATCTGCACTCTGTCCTCACGAGTCCCGTTCTGTCAGGATTAAAAGAGGCGCTCATGGTGGGCTTTTTTTTGGCAGGCACGGTTATCAGATGGTTTTAAAAGGAAGATTCACTTGGTGTCGGCGCTGAGAAAAATCCCAGTGCATGGAGACTGGACCCTCGCAGCTGGACTGAACCATCTCAAGCGAGCCGCGGGGTGAGCCGATTCTAATAGACGCGTTCTCTCCTAAAAGCTGACGAGCTGGTAATGAGAACTGTATCTGGTCTCTTCGAGCTCACATGAACGTTACAAACGGATAAAGTCTGGAGCCGATTCAAACGGATGATGCGACATACGCCT
>TU263427
ATGTCATGGCCCTTTTCAGATCAAAACAGTAATAAATAAATTAGAAGACTATCATACTCTCATATCGGATGCGGAAGCCGATGTCGGAGTGGCTCTTGTCGGTGGTGAAGAGCAGGTAGAGGAAATTTGAGGTGCTGATGAGGAACTGAGGGACCTGTGTACCCTGGTAACTGCCAATCAGAGGTGAAGAAGGATAACGTCCGTCCCGTACCTCGAGAACATCATAGTTAACCTCTGTCCGGAATTTGTCAAAGATGATCTTAATAGGATATCCTGGTGGGGCCTCGATGATCCACTCACAATTGAGAGCCTCTTTATAAAGCTCAGGCCAGCCTGGGGACAGAATGATGCCGCTAGAAGCCTTCAGGTTTCCACCACATGGAGCTTCACAACGTGGCACAGCGTTGTCCCACACAACATTCCCATCTTTGAGAATGCAGGAGATAGTCTGAGATCCGTGGGTCTTCATGAACCCCTCCTCACACAGGAAAGAGATGGAGCTGCCAAGCTGTAGACTCTCACCAAAGCGCTTTCCGTTTACTGGAACGCCAGGGTCGGGACATTCGTTGTGCCGAAACGTGGTGAAAGTGATGTTGAAGCCACGGTCTGTATACGTATGATCGGTCAGAAATTCCAGTCGGGCCACATGGCCGCTGGTAGTGATGGGTGAGGGCAGCACATCTCCAGAAAAGGTGCCAAGAATTGGCGACTCTGCCTTGCCGCCATCTTTAATGGACAGGAAGTCAAATTGTTTCTCCATGCTCAGGTCGTTAAAGGCTAAGTTGATGCGGCTTTCGGGTTTGGCGATGATCAACCACACACAGTGCATGTTGTTGCCGTACTCCTGAGGGTAGTTTGGTGATAGCAGGACCCCAGATGGAGTTGTGAAGTTGAAGAAACATGAAAACACACAGCTTGGCTTCTTGGCTGACCATTGATTATTTTTCTGGCAGGTAATGTTCTTTTTTCCCACCAACTCAAAGGCTGGAAGGCATTCAAAATATAGTTTGTCTCCATGTCGGAAGCCTGTGCCTTCCCTCTTGCCATAGGCTGGGATTCCAGGGTCTCCACACCCACCCTGGTCAATTTCTTCATAAGAAACCTTAAAGCCCAGGGAGCCACTCGTGTCGTCCGTTTTAAAATTGAGCCACATCTGATGGCTGGTACTGACCACCAGATCTGGAGTTGTAGTCCCAGACAACACATGAAAGACTGTCCGCTGATCGCCGATTACAGTGCCGTCACCCACAGTTAGAGTATCGTAGCCCCGCTCCAAGTCAAACTCTTCAAAAGTCAGCTTGATCACCTAC
>TU263426
CCCAACCATGAACTATAAACTCTTCCACAGAAAAACAGTATATATAAAGCATATAAGAATGAAAGGCTTTTAAGATTATTGGCTACATTCAGTAAATGATTACTCTTGACTGGTAGCATATTTATCAGTTAACTAACCTAACATCTGATATGGCAGTACACATGGTACAATTATGTTTGCTGATAGACATCCACGCAGTAATTAGCTCTACTGAGGAAGGCACTGTCACTGAGTGTGAGTATTTAGTGTCTTACCCACACACAGTGGAAGGGGGCTGTCCCATGCTCTCCTCTCCCCTCTGAGACATGTCAAAACCTCCGGGCCCTTTAAACTGTAGCCAGGATCACAGCTATATGACACCGTGCTGCCTGCGAAGTGACCTTTGTCCTCCCGTTTAAAGCCAAACTGAGGCACACCTGGGTCCTCACATTTCACCAACTCAAAACTGGTGAAGTGCAGCTCAAAACCTTTGCTGGTATTGTCACTATTACTAATGAACTCTAGCCACATGGTGCTGGACGTGCTGTTTAAAGTGACATCCATCAGCTCTGTGCCTGTGAATATTCCCAGCAGTCGAGCACTGTTACTGTTACCATCATACACCTTAAGCATGTCATCCTCCTCCAGGCGGAAATCCCGTGCTCGGAGCTGGATGCCTTTACCGGGTTGGGTTTGGATGGAGTAGATGCACTCATGATTGTTACCGTAATAACCAGGGTAGTTTGGAGAGAGTAAAACTCCTTGTTTCCCAGTTACAGATGATCCGCATTCAGCAACACACCTTGGCAGAGGGGAACTCCACACCCGCCGACGCCCCCCTAGACACACCACCCTCGCTGGCCCCTCGAGACGATACCCCGGAAAACAGGAGAAGATAAGCGCATCCCCCACCCCGAACTGCAGCCCTTTACGAGTGCTGAAGGGGGGGACGCCGGGATCTTCACAAGGCTCAAGATCGTATTCTGAGAAAGTGATGTTAAAGCCCTCATAGGACACAGAGAAGTCTGAGAGGAAACGGATCTGAGCGGTGTAGTTGCCAAAGAGTCCAGCGCTAAGAGGGGGCGGCAGCGTAGACCCGGTCAATCTCCACAGGGGTTGAGAGAAACTACCATTTTCTGTGACTAAAAGGTGGTCGTGCGGACTCTCCAAGTGAAAGGTGTGGAAGGTAAACTGGACACCTTTACCATGTGAAGTCTCAATCATCCAGGTACAGTTGAGGTTATGGGGGTAGAAGTCAGGAAACCCAGGGGACAGAATAGTGCCGCTGTTCCCCTGAATAAACCCTCCACATAGTGCATCACAGCTGGGCAGGGGGCGACTCCACTGGAAGTTGGGTTCACACTCGAGGGGCTCGTGGTCACTGAGGGTGTATCCTGCTTCGCAACTAAATGTCACCAATGCTCCCACGTAAAAATCATTGCCATGACGCTGACCGTTGACTGGGATTCCAGGATCAACGCAATGGTCCGACTGGAGTTGCAAGGCTTGAGAGGAGAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263421 False 5054 lncRNA 0.52 29 4923922 5139595
TU263425 False 916 lncRNA 0.47 2 4923922 4945774
TU263427 False 1310 lncRNA 0.49 7 5091438 5108760
TU263426 True 1500 lncRNA 0.49 7 5110685 5115725

Neighbor

gene id symbol gene type direction distance location
CI01000054_04671351_04681181 PEF1 coding downstream 242561 4670151 ~ 4681361 (-)
CI01000054_04463229_04486856 DLGAP3 coding downstream 437066 4462888 ~ 4486856 (-)
CI01000054_04411682_04448848 NA coding downstream 475074 4411429 ~ 4448848 (-)
CI01000054_04264074_04331270 THSD7AA, THSD7A coding downstream 592652 4263862 ~ 4331270 (-)
CI01000054_04210959_04214380 NXPH1, NXPH4 coding downstream 709542 4209840 ~ 4214380 (-)
CI01000054_05292456_05317677 NA coding upstream 152704 5292299 ~ 5318991 (-)
CI01000054_05341497_05372926 ANGPT2B coding upstream 201515 5341110 ~ 5372926 (-)
CI01000054_05685529_05686880 NA coding upstream 545905 5685500 ~ 5687414 (-)
CI01000054_05711250_05711861 NA coding upstream 571027 5710622 ~ 5712639 (-)
CI01000054_05822181_05823458 ZN706, ZNF706, ZFP706 coding upstream 682573 5822146 ~ 5823684 (-)
G232102 NA non-coding downstream 6161 4903066 ~ 4917761 (-)
G232076 NA non-coding downstream 87813 4835856 ~ 4836109 (-)
G232051 NA non-coding downstream 150804 4772830 ~ 4773118 (-)
G232013 NA non-coding downstream 258255 4665428 ~ 4665667 (-)
G232012 NA non-coding downstream 258681 4664985 ~ 4665241 (-)
G232236 NA non-coding upstream 3229 5142824 ~ 5153011 (-)
G232241 NA non-coding upstream 13824 5153419 ~ 5169691 (-)
G232247 NA non-coding upstream 24331 5163926 ~ 5164299 (-)
G232251 NA non-coding upstream 33234 5172829 ~ 5176778 (-)
G232266 NA non-coding upstream 56341 5195936 ~ 5196551 (-)
G231645 NA other downstream 941099 3981847 ~ 3982823 (-)
G230908 NA other downstream 1860579 3057648 ~ 3063343 (-)
CI01000054_02857402_02860451 NA other downstream 2063349 2857402 ~ 2860573 (-)
G230923 NA other downstream 2086240 2837237 ~ 2837682 (-)
G232274 NA other upstream 66604 5206199 ~ 5209240 (-)
CI01000054_06629482_06641861 TRIQK other upstream 1488487 6628082 ~ 6642160 (-)
CI01000054_07165957_07169539 HEYL other upstream 2025840 7165435 ~ 7169539 (-)
G235216 NA other upstream 4108444 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 4343552 9483147 ~ 9484282 (-)

Expression


Co-expression Network