Gene
RNA
| Item | Value |
|---|---|
| gene id | G232406 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 5357436 ~ 5359008 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU263711 | False | 257 | lncRNA | 0.44 | 2 | 5357436 | 5358241 |
| TU263713 | True | 409 | lncRNA | 0.47 | 2 | 5357863 | 5359008 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_05292456_05317677 | NA | coding | downstream | 38445 | 5292299 ~ 5318991 (-) |
| CI01000054_04671351_04681181 | PEF1 | coding | downstream | 676075 | 4670151 ~ 4681361 (-) |
| CI01000054_04463229_04486856 | DLGAP3 | coding | downstream | 870580 | 4462888 ~ 4486856 (-) |
| CI01000054_04411682_04448848 | NA | coding | downstream | 908588 | 4411429 ~ 4448848 (-) |
| CI01000054_04264074_04331270 | THSD7AA, THSD7A | coding | downstream | 1026166 | 4263862 ~ 4331270 (-) |
| CI01000054_05685529_05686880 | NA | coding | upstream | 326492 | 5685500 ~ 5687414 (-) |
| CI01000054_05711250_05711861 | NA | coding | upstream | 351614 | 5710622 ~ 5712639 (-) |
| CI01000054_05822181_05823458 | ZN706, ZNF706, ZFP706 | coding | upstream | 463160 | 5822146 ~ 5823684 (-) |
| CI01000054_05827691_05828736 | WDYHV1 | coding | upstream | 468385 | 5827393 ~ 5830717 (-) |
| CI01000054_05853193_05858118 | WISP1A | coding | upstream | 494067 | 5853075 ~ 5858118 (-) |
| G232275 | NA | non-coding | downstream | 136940 | 5211878 ~ 5220496 (-) |
| G232266 | NA | non-coding | downstream | 160885 | 5195936 ~ 5196551 (-) |
| G232251 | NA | non-coding | downstream | 180658 | 5172829 ~ 5176778 (-) |
| G232241 | NA | non-coding | downstream | 187745 | 5153419 ~ 5169691 (-) |
| G232247 | NA | non-coding | downstream | 193137 | 5163926 ~ 5164299 (-) |
| G232432 | NA | non-coding | upstream | 45053 | 5404061 ~ 5409322 (-) |
| G232437 | NA | non-coding | upstream | 52559 | 5411567 ~ 5412115 (-) |
| G232439 | NA | non-coding | upstream | 55216 | 5414224 ~ 5414542 (-) |
| G233356 | NA | non-coding | upstream | 115137 | 5474145 ~ 5474392 (-) |
| G233420 | NA | non-coding | upstream | 391338 | 5750346 ~ 5751278 (-) |
| G232274 | NA | other | downstream | 148196 | 5206199 ~ 5209240 (-) |
| G231645 | NA | other | downstream | 1374613 | 3981847 ~ 3982823 (-) |
| G230908 | NA | other | downstream | 2294093 | 3057648 ~ 3063343 (-) |
| CI01000054_02857402_02860451 | NA | other | downstream | 2496863 | 2857402 ~ 2860573 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | upstream | 1269074 | 6628082 ~ 6642160 (-) |
| CI01000054_07165957_07169539 | HEYL | other | upstream | 1806427 | 7165435 ~ 7169539 (-) |
| G235216 | NA | other | upstream | 3889031 | 9248039 ~ 9248538 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | upstream | 4124139 | 9483147 ~ 9484282 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 4504313 | 9863321 ~ 9867212 (-) |
