G232443


Basic Information

Item Value
gene id G232443
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 5418632 ~ 5418869 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU263754
CACATATAAACATTGATCAACTCACACATCTGTTGTGGTAAACGGAAGCTCAAGCATGTTTGCTGTGCGAGAACCAGTAAGGTTCATTCTCGTGTGTTACACAGCACGTTTGAGCTTCTGCAAGAGGTTTGCTCTCACGCGTCAAGCTTCTGTTTATGTTCGCTGATCAATGTAGCTCTCAGATTTCATTTGTGTTCTGAAGATGAACAAAGGTCTTACGGGTTTGGAACGACATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263754 True 238 lncRNA 0.43 1 5418632 5418869

Neighbor

gene id symbol gene type direction distance location
CI01000054_05409518_05413525 NA coding upstream 4645 5409302 ~ 5413987 (+)
CI01000054_05402279_05408977 TRAPPC3.S, TRAPPC3, TPPC3 coding upstream 9547 5401447 ~ 5409085 (+)
CI01000054_05145255_05217807 CSMD2 coding upstream 200821 5145111 ~ 5217811 (+)
CI01000054_04962081_04977729 NA coding upstream 440695 4961930 ~ 4977937 (+)
CI01000054_04924205_04945546 NA coding upstream 472791 4924159 ~ 4945841 (+)
CI01000054_05538535_05543989 COL8A2 coding downstream 118539 5537408 ~ 5545034 (+)
CI01000054_05567094_05576916 PTP4A1, PTP4A2.L, TP4A2, PTP4A2B, PTP4A2 coding downstream 148225 5567094 ~ 5577023 (+)
CI01000054_05579068_05592326 ANLN coding downstream 160199 5579068 ~ 5592503 (+)
CI01000054_05595391_05599507 AK2 coding downstream 176084 5594953 ~ 5599695 (+)
CI01000054_05608892_05634793 RNF19B coding downstream 189588 5608457 ~ 5634804 (+)
G232379 NA non-coding upstream 17520 5400368 ~ 5401112 (+)
G232368 NA non-coding upstream 60960 5357241 ~ 5357672 (+)
G232293 NA non-coding upstream 157870 5259996 ~ 5260762 (+)
G232116 NA non-coding upstream 237173 5102226 ~ 5181459 (+)
G232094 NA non-coding upstream 525590 4892757 ~ 4893042 (+)
G232467 NA non-coding downstream 55176 5474045 ~ 5474333 (+)
G232499 NA non-coding downstream 208703 5627572 ~ 5627795 (+)
CI01000054_05696772_05708538 NA non-coding downstream 275468 5696093 ~ 5708637 (+)
G232519 NA non-coding downstream 419414 5838283 ~ 5838874 (+)
G232521 NA non-coding downstream 440751 5859620 ~ 5859877 (+)
G231863 NA other upstream 967902 4407152 ~ 4450730 (+)
CI01000054_03848427_03914231 NA other upstream 1505086 3848427 ~ 3914231 (+)
G230689 NA other upstream 2331240 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 3114250 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 3691839 1725627 ~ 1726793 (+)
G232558 NA other downstream 574791 5993660 ~ 6041863 (+)
CI01000054_06305908_06312122 NA other downstream 885438 6305908 ~ 6312163 (+)
G232659 NA other downstream 955981 6374850 ~ 6375894 (+)
G232870 NA other downstream 1469043 6887912 ~ 6888503 (+)

Expression


Co-expression Network