G232558


Basic Information

Item Value
gene id G232558
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 5993660 ~ 6041863 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU263881
CCTAAAAAGACAACATAAAAAAAAAAATATATATATATAACTAACTAACAAGTTTATGGTCATTGAATGGCTTTTCTGAGGTATATGTAACATTACGTGACATTGTTTACAAGCTGTTTTACCAACGTCTTTCGGCAGTTGAAACACTGATTGAGTGATTACATGTGATCTGATACAGATTTCTGTAAGTTTTACTGTATCTTTCAGCATCCGTCGGATGTTCATTCATGTTTATTTTGTGCTGTAACTAGTAGTAAAGCGGAAGAGATGATCGGTTCACACGCGCTCCACGCTGCCGCTTCACTTGAACTGAGGTGCTACAGCAATCTGTCGAGCCACAATAAAGAGCGCCAAAACAGTATTTATTGTTAGTATTTTTTAGACTTTGTTTAAACCATGTGGCATGTACAAAAGAGTTTTCTCAGACTCATACTTTTGTCTTAATACTGTCTTTGTCTAACAAATCTTTTGTCATATGTTATGTCTGGAAAGTGTGCTTTTATCTTAATATCAACTTTGGCTATTTTGTTCATGTGTCCAGAAACTTTCTGGGTGTGTGAACTCACTGTTCTGGTGAGTTGATGTCTTCTAGTGGACCTCTGCTTATCCTAGAAGGATCCATGGATCCCCACTGAGCTTGAGGTTTCTGCTCTAAGTGGTTCTTCAGAGATTTCTCTCCATCTTTGCCGTCAGTGAAGTTGCGTATGCTCAGGATATTGTTGACATCTTGGTAGTGGTTTTGTTTAATGTACGGAGTCTTTTCTGGAGTGTCCTGGAGTTGCATGGTAACCTCTTCCAGTTCCTTATCCAGCTCTGTAATTCTCATTCGCAGGCGGTGGTTGTCTGTCTGTAGTCCATCCAGACGGGAAGTGTTGGCCTGGTTAACACTGGTTACTGAGGTGGAAGTCTTGGAATCTTCCTTCTTCTGGTTCTGGGTGAACTTTAACCTCCGGTTTTGTGTGGCAGCATCCGGGTTTGTTCGCATTGTGATAAACTTTGGCACAAACACCAGACACAGCGTGATGGTGCTGCAGAAGATGATGACCAGTGCCACGATGCAGAACTGCACATTAGGCTGATCTCGGGTCAGGAAGGACACTGCTGCCCCAATGATACACATGATGCCCACATTATACACACTCATACCGATGTACTTGCTGTCGTTCAGGGCTGGAATGCTCACATTTCTGGTCTCCCAGGCCAAAAAACATCCAAACAACATAAGGAGGCCTTTGTAGGCATAGACAATCCCCAGCCAAATGGTCATGTGCGTGTTCTCGCAGTGCTCCAGGAAGGGCCGGATTGCGATGTCTCGTCCCTGAGGATCCGCCTCCAAGCTGTACTCTTCCACAGTTCTCTTCAGGGGATCCACGATCTGCCAGCATATGAGAATGCACAAATCAATCAGCAACATCCCACCCACGATGATAAAGAGCTTCTGGTCCTTGATAATCTTCTTCTTCATCTTTACATTCTTGAAGATGGCGTGCACTCTCCAGGTCTTCGCAAACATGGCTCCAAACGCTGTTGTGTAACCCACAATGAGGATCCATGTACGGACCTAAAAACGTTAAATGTGAAAGTAAAACAAGGTTGTTACAAACCAAAAGTTCTTATAATTTAGGCACTAGAATGCTAAATGCTACCCCAAATGTAAGATTGTACTGTAACACCAGTCAACAGAATACAAAGCAGCAGAAACAAAGCAGGAAGTGATCCCACTATTAGAAAGCATATCGGATGTCAGGGTGCGTAGTGAATTCTGTGGAAGTTGTAGAAGTTCCTGAGGCATATTTTTTTCTCTTTGTCCTCTCTTCATCTTCCGTCTCTCTTACTCTCTCCCACAGATCTAGTGTTCTTTATTCTGATCTCCTCTGGGAAACTAATTCTCAGCATGTATAAGGCAGGACGATAAGGCTCGGAAACAGTTTGAGAGTTTTGGGACAGTTTATAGAACTGCTGCGCTGTTGCTACATCTTGTTTGTTGAGTTTTGATGTGGTTTTATGCGATGTGTTGTTGTGGATTCTGCTGAATTAAATTAACTCACAAAATACATGTTGAAACTGTGACTGAAATGCAATCTTATTGTACCATAAAGCAAATGTGTTGATGAATTTATAGTTGTCATGGAGTTACAGCTGTAAAAATGGTCACATATTATTGTTTATAAACCTAAATTAAAGGGTTAGTTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263881 True 2196 TUCP 0.42 7 5993660 6041863

Neighbor

gene id symbol gene type direction distance location
CI01000054_05989042_05989389 NA coding upstream 3865 5989042 ~ 5989795 (+)
CI01000054_05957906_05981499 ELP2 coding upstream 11438 5957399 ~ 5982222 (+)
CI01000054_05926683_05953807 CTNNAL1 coding upstream 39705 5926683 ~ 5953955 (+)
CI01000054_05875546_05877938 SLA1 coding upstream 115338 5875479 ~ 5878322 (+)
CI01000054_05841632_05851621 NDRG1A coding upstream 141133 5841496 ~ 5852527 (+)
CI01000054_06292147_06297237 NA coding downstream 250113 6291976 ~ 6297560 (+)
CI01000054_06305908_06312122 NA coding downstream 264045 6305908 ~ 6312163 (+)
CI01000054_06411594_06411984 NA coding downstream 369731 6411594 ~ 6412521 (+)
CI01000054_06434217_06435680 OTUD6B coding downstream 391893 6433756 ~ 6435680 (+)
CI01000054_06437628_06441214 NA coding downstream 395765 6437628 ~ 6441481 (+)
G232545 NA non-coding upstream 98693 5894748 ~ 5894967 (+)
G232539 NA non-coding upstream 103655 5889794 ~ 5890005 (+)
G232532 NA non-coding upstream 120805 5872373 ~ 5872855 (+)
G232530 NA non-coding upstream 123237 5870198 ~ 5870423 (+)
G232526 NA non-coding upstream 126571 5866867 ~ 5867089 (+)
G232606 NA non-coding downstream 92654 6134517 ~ 6136029 (+)
G232648 NA non-coding downstream 244402 6286265 ~ 6287079 (+)
G232664 NA non-coding downstream 373800 6415663 ~ 6416211 (+)
G232674 NA non-coding downstream 387268 6429131 ~ 6429432 (+)
G232684 NA non-coding downstream 409995 6451858 ~ 6452068 (+)
CI01000054_05608892_05634793 RNF19B other upstream 368985 5608457 ~ 5634804 (+)
G231863 NA other upstream 1542930 4407152 ~ 4450730 (+)
CI01000054_03848427_03914231 NA other upstream 2080114 3848427 ~ 3914231 (+)
G230689 NA other upstream 2906268 3078502 ~ 3087392 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 3689278 2289802 ~ 2330981 (+)
G232659 NA other downstream 332987 6374850 ~ 6375894 (+)
G232870 NA other downstream 846049 6887912 ~ 6888503 (+)
G233024 NA other downstream 1525660 7567523 ~ 7609893 (+)
G233306 NA other downstream 2262736 8304599 ~ 8304949 (+)

Expression


Co-expression Network