G232648


Basic Information

Item Value
gene id G232648
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6286265 ~ 6287079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU263987
ATCGCCTATTACAAACATTAAGAAAGAATAATGTAAGAAATGGTGGTGGTGATAATAACATACGGCTATTCGCAAGGGGAAAATAACCAGTTAAGACGCAGTTTGTAGCAGCACAATTAAACGTTTAGTAACAATAAAAAAGTGCGAGTGCTGTATGCACCTACCTGCAGCTGGAGTTCAGTGACACGCGCTCTTCTGAAAGGTGACGCACTGGTAACGCGCGCGCTGAAGTGAGCGCTCGCGGTCATCCACCGTCCTCCTCAAAAAGCCTCCGCGTTCCGTACCTTGTTCTCTTCCCGGTCACGTTATAAGAAGCCTCGTTCACAACACTATAGTCTCATATTATTTGTCAGGCAGTGACAGAGCGCGCGTCTACACCCTCTGCCTCTCTGGCCGCGAGCCCGCTGAGAGTGAACGTGAACTGCTTTCTCCGCTGCCTTAAATATCCAATTTCATCGACGCAGCGCCTCGGGCCATCTGAGTCCGTGTGATGATGATTTCCTCTCTGTAATCTGTGTGAGAAGGGACGCAGCAAACGGTCCAGGAGGAGTCCGTCCTCGTGTAATGTTAAATGGGTTATTAAAGTCCCTCGACAGTAATTGCGGGAAAACAATTTTCTGAAACAATCAATCTTGTTTTCTTTCGCGTGGTTTTTTTTGGCTGCTTGAAATTTCTATCAATTTATTTTTGACAAATGATAATCATATTAACAATGGCAACAAGAATAATATTATATTATATATTATATTAGTAGACTAACTAAAACTTTTTTTTTTTTTTTTTTTACAAATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263987 True 795 lncRNA 0.42 2 6286265 6287079

Neighbor

gene id symbol gene type direction distance location
CI01000054_05989042_05989389 NA coding upstream 296470 5989042 ~ 5989795 (+)
CI01000054_05957906_05981499 ELP2 coding upstream 304043 5957399 ~ 5982222 (+)
CI01000054_05926683_05953807 CTNNAL1 coding upstream 332310 5926683 ~ 5953955 (+)
CI01000054_05875546_05877938 SLA1 coding upstream 407943 5875479 ~ 5878322 (+)
CI01000054_05841632_05851621 NDRG1A coding upstream 433738 5841496 ~ 5852527 (+)
CI01000054_06292147_06297237 NA coding downstream 4897 6291976 ~ 6297560 (+)
CI01000054_06305908_06312122 NA coding downstream 18829 6305908 ~ 6312163 (+)
CI01000054_06411594_06411984 NA coding downstream 124515 6411594 ~ 6412521 (+)
CI01000054_06434217_06435680 OTUD6B coding downstream 146677 6433756 ~ 6435680 (+)
CI01000054_06437628_06441214 NA coding downstream 150549 6437628 ~ 6441481 (+)
G232606 NA non-coding upstream 150236 6134517 ~ 6136029 (+)
G232545 NA non-coding upstream 391298 5894748 ~ 5894967 (+)
G232539 NA non-coding upstream 396260 5889794 ~ 5890005 (+)
G232532 NA non-coding upstream 413410 5872373 ~ 5872855 (+)
G232530 NA non-coding upstream 415842 5870198 ~ 5870423 (+)
G232664 NA non-coding downstream 128584 6415663 ~ 6416211 (+)
G232674 NA non-coding downstream 142052 6429131 ~ 6429432 (+)
G232684 NA non-coding downstream 164779 6451858 ~ 6452068 (+)
G232689 NA non-coding downstream 172802 6459881 ~ 6460125 (+)
G232691 NA non-coding downstream 175948 6463027 ~ 6463256 (+)
G232558 NA other upstream 244402 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 661590 5608457 ~ 5634804 (+)
G231863 NA other upstream 1835535 4407152 ~ 4450730 (+)
CI01000054_03848427_03914231 NA other upstream 2372719 3848427 ~ 3914231 (+)
G230689 NA other upstream 3198873 3078502 ~ 3087392 (+)
G232659 NA other downstream 87771 6374850 ~ 6375894 (+)
G232870 NA other downstream 600833 6887912 ~ 6888503 (+)
G233024 NA other downstream 1280444 7567523 ~ 7609893 (+)
G233306 NA other downstream 2017520 8304599 ~ 8304949 (+)

Expression


Co-expression Network