G232659


Basic Information

Item Value
gene id G232659
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6374850 ~ 6375894 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264006
GCCTTAAAATAGCTTGAATGTAACTCTATACCCTTGCCTCATTTAGCATACGTGGTTCTATGAATATACAAATTAGCCCCACCTCCACTCACTCACACTAGCTCAGAGATCCACTCGTTGACGATCACACATTGACATGATTGGTTACAAGGTAGTTTGTGACATCAGGAACACCGGCGATTTCAAACCGAAGACTGGAGTGGAGTAATGATCACAGCCATCACAGAAATAATATATTAAGATGGAACACAATTTCACAATATTATTGTTTTTACTGTATTTTTTTGATGAAATTAATGCAGTCTTGGTGAGCAGAAGAAACATTCTATTAACTAATGATTTAAGAAGAGGGTGCCAAAAATCATTGATATTACTTGTGGTTCTTTCATCACATTTGAAATGTAATGTCAAGTTGAGGATATTACATTGTGGGATACAGAATTTGGTTCTGGTTACAAACTCCTTATTTATTCCATACATGCAAAAATTGGCATTTTTGCACAGTAGACATACTCCAAACTGCAAATGTACCAAGTTAGTACGCCCTTCTAAGCATACCCTCTCAGTTTCTCTCGCTTTGTTTCTCTGTTTGTAATCAACCACGTTTTTACTCTGTGGTTCCTCTTTTCAGCGCCTCAGACTGACCAGGGTCCATCCGAAAGCAAGAACTTTCAAACACAGCATAATTGGCAACCCTAAATCCAGTCAGGCAGCCACAGAGAGCCCTCATCCTCAAAGCCAACCATCTCACATTTTCTGAAAAGCGCAGATTAGTTTGAAGTAGATGGTCGAGCAGAGGGAGCCGATATCGCAGTCGTAGCATTTGCAGAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264006 True 834 TUCP 0.40 2 6374850 6375894

Neighbor

gene id symbol gene type direction distance location
CI01000054_06305908_06312122 NA coding upstream 62687 6305908 ~ 6312163 (+)
CI01000054_06292147_06297237 NA coding upstream 77290 6291976 ~ 6297560 (+)
CI01000054_05989042_05989389 NA coding upstream 385055 5989042 ~ 5989795 (+)
CI01000054_05957906_05981499 ELP2 coding upstream 392628 5957399 ~ 5982222 (+)
CI01000054_05926683_05953807 CTNNAL1 coding upstream 420895 5926683 ~ 5953955 (+)
CI01000054_06411594_06411984 NA coding downstream 35700 6411594 ~ 6412521 (+)
CI01000054_06434217_06435680 OTUD6B coding downstream 57862 6433756 ~ 6435680 (+)
CI01000054_06437628_06441214 NA coding downstream 61734 6437628 ~ 6441481 (+)
CI01000054_06756071_06757443 NA coding downstream 379915 6755809 ~ 6757514 (+)
CI01000054_06759472_06761310 NA coding downstream 382917 6758811 ~ 6761310 (+)
G232501 NA non-coding upstream 28217 5918059 ~ 6346633 (+)
G232648 NA non-coding upstream 87771 6286265 ~ 6287079 (+)
G232606 NA non-coding upstream 238821 6134517 ~ 6136029 (+)
G232545 NA non-coding upstream 479883 5894748 ~ 5894967 (+)
G232539 NA non-coding upstream 484845 5889794 ~ 5890005 (+)
G232664 NA non-coding downstream 39769 6415663 ~ 6416211 (+)
G232674 NA non-coding downstream 53237 6429131 ~ 6429432 (+)
G232684 NA non-coding downstream 75964 6451858 ~ 6452068 (+)
G232689 NA non-coding downstream 83987 6459881 ~ 6460125 (+)
G232691 NA non-coding downstream 87133 6463027 ~ 6463256 (+)
G232558 NA other upstream 332987 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 750175 5608457 ~ 5634804 (+)
G231863 NA other upstream 1924120 4407152 ~ 4450730 (+)
CI01000054_03848427_03914231 NA other upstream 2461304 3848427 ~ 3914231 (+)
G232870 NA other downstream 512018 6887912 ~ 6888503 (+)
G233024 NA other downstream 1191629 7567523 ~ 7609893 (+)
G233306 NA other downstream 1928705 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1930043 8325126 ~ 8329716 (+)
G235560 NA other downstream 4012242 10388136 ~ 10392378 (+)

Expression


Co-expression Network