G232684


Basic Information

Item Value
gene id G232684
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6451858 ~ 6452068 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264032
GGAACTTAACAGAGCATTACTGACAGACTGGGAAGAGAGGTGCTGCAACAATGTCAAATATGTGAAAAATAATGTATTTTAAGCATGAAAACCTATTCTAGATAACCCCAAAAACAAAATCAAGACTTTGTAAAAGGGCATAATATGGCATCTTTAAAGACAATATCAATCTCCCTTTTCTCTTACTGCACAGTAGTTCATTCAATGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264032 True 211 lncRNA 0.35 1 6451858 6452068

Neighbor

gene id symbol gene type direction distance location
CI01000054_06437628_06441214 NA coding upstream 10377 6437628 ~ 6441481 (+)
CI01000054_06434217_06435680 OTUD6B coding upstream 16178 6433756 ~ 6435680 (+)
CI01000054_06411594_06411984 NA coding upstream 39337 6411594 ~ 6412521 (+)
CI01000054_06305908_06312122 NA coding upstream 139695 6305908 ~ 6312163 (+)
CI01000054_06292147_06297237 NA coding upstream 154298 6291976 ~ 6297560 (+)
CI01000054_06756071_06757443 NA coding downstream 303741 6755809 ~ 6757514 (+)
CI01000054_06759472_06761310 NA coding downstream 306743 6758811 ~ 6761310 (+)
CI01000054_06789505_06789810 NA coding downstream 336294 6788362 ~ 6789946 (+)
CI01000054_06795526_06796596 TRIB1 coding downstream 343458 6795526 ~ 6796644 (+)
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding downstream 413313 6865381 ~ 6869942 (+)
G232674 NA non-coding upstream 22426 6429131 ~ 6429432 (+)
G232664 NA non-coding upstream 35647 6415663 ~ 6416211 (+)
G232501 NA non-coding upstream 105225 5918059 ~ 6346633 (+)
G232648 NA non-coding upstream 164779 6286265 ~ 6287079 (+)
G232606 NA non-coding upstream 315829 6134517 ~ 6136029 (+)
G232689 NA non-coding downstream 7813 6459881 ~ 6460125 (+)
G232691 NA non-coding downstream 10959 6463027 ~ 6463256 (+)
G232719 NA non-coding downstream 80953 6533021 ~ 6533230 (+)
G232721 NA non-coding downstream 85911 6537979 ~ 6538207 (+)
G232728 NA non-coding downstream 103340 6555408 ~ 6555639 (+)
G232659 NA other upstream 75964 6374850 ~ 6375894 (+)
G232558 NA other upstream 409995 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 827183 5608457 ~ 5634804 (+)
G231863 NA other upstream 2001128 4407152 ~ 4450730 (+)
G232870 NA other downstream 435844 6887912 ~ 6888503 (+)
G233024 NA other downstream 1115455 7567523 ~ 7609893 (+)
G233306 NA other downstream 1852531 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1853869 8325126 ~ 8329716 (+)
G235560 NA other downstream 3936068 10388136 ~ 10392378 (+)

Expression


Co-expression Network