G232689


Basic Information

Item Value
gene id G232689
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6459881 ~ 6460125 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264037
CAATATTCCGAGGATGGCAGCCTGGATCGTGTTGGTGTGATATCTCACATGAGAAATCCTCTGTGGAAGACTATATTAGCAGAATGATGGATAACACAGTCCCACTCAATGAATTCAAACGTTTCTAGTGCCAAAATCCTGGTGGGGAACTATGATGATTCAACGGCCCCAAAATTGATCGAAACATTACTACCAAGGCCTCAACTCAACACATTTCTTCATTTTACATTGATTCTTCGTCAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264037 True 245 lncRNA 0.42 1 6459881 6460125

Neighbor

gene id symbol gene type direction distance location
CI01000054_06437628_06441214 NA coding upstream 18400 6437628 ~ 6441481 (+)
CI01000054_06434217_06435680 OTUD6B coding upstream 24201 6433756 ~ 6435680 (+)
CI01000054_06411594_06411984 NA coding upstream 47360 6411594 ~ 6412521 (+)
CI01000054_06305908_06312122 NA coding upstream 147718 6305908 ~ 6312163 (+)
CI01000054_06292147_06297237 NA coding upstream 162321 6291976 ~ 6297560 (+)
CI01000054_06756071_06757443 NA coding downstream 295684 6755809 ~ 6757514 (+)
CI01000054_06759472_06761310 NA coding downstream 298686 6758811 ~ 6761310 (+)
CI01000054_06789505_06789810 NA coding downstream 328237 6788362 ~ 6789946 (+)
CI01000054_06795526_06796596 TRIB1 coding downstream 335401 6795526 ~ 6796644 (+)
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding downstream 405256 6865381 ~ 6869942 (+)
G232684 NA non-coding upstream 7813 6451858 ~ 6452068 (+)
G232674 NA non-coding upstream 30449 6429131 ~ 6429432 (+)
G232664 NA non-coding upstream 43670 6415663 ~ 6416211 (+)
G232501 NA non-coding upstream 113248 5918059 ~ 6346633 (+)
G232691 NA non-coding downstream 2902 6463027 ~ 6463256 (+)
G232719 NA non-coding downstream 72896 6533021 ~ 6533230 (+)
G232721 NA non-coding downstream 77854 6537979 ~ 6538207 (+)
G232728 NA non-coding downstream 95283 6555408 ~ 6555639 (+)
G232735 NA non-coding downstream 123506 6583631 ~ 6583921 (+)
G232659 NA other upstream 83987 6374850 ~ 6375894 (+)
G232558 NA other upstream 418018 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 835206 5608457 ~ 5634804 (+)
G231863 NA other upstream 2009151 4407152 ~ 4450730 (+)
G232870 NA other downstream 427787 6887912 ~ 6888503 (+)
G233024 NA other downstream 1107398 7567523 ~ 7609893 (+)
G233306 NA other downstream 1844474 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1845812 8325126 ~ 8329716 (+)
G235560 NA other downstream 3928011 10388136 ~ 10392378 (+)

Expression


Co-expression Network