G232694


Basic Information

Item Value
gene id G232694
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6628293 ~ 6629575 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264042
ATGAGACTCTTTGTTTTGGTTTAGTTCAGTCTCACTATGAAAGAATTTGGAAAGCTCTCGAGGCTAAATCAAAGACAGACTACAAAAATGTTTTGTTCAATAGGGTATCAATCCTTGAATTAATGATAACAGTCAGACGTCCCAGGAAAATAAGGGTTGAGCAGCAAAGCAGTTGTCCTGAGTTAGAGACATACACCTCATGCAGGGAAAGATAAAACAACTCTCACGGCCTGGAATGAAATAAGTCGTTGCTGTGCGTTTGTACGAGATCCAATGCGCTATACAAAGAGAATGTAAATGAACTTTGAATGTCATCAGCTCCAGCCTTTCATTTTCCACCCTACGACTCTCTCTTTTCTCCCACGAACGCACACACACAGGCCCAGCAGTGTGTAAAGGAAGCACTGGATGTCAGAGACCAAGGCAGGGCCATGCGTTTTATCTTCAGAGATACATCAAAAGATGCACACTAGCTAAAAGTAACAGCACCTCGCTGATTGATAATGCTTCAAGTTCTGTACTATACATGTCTCTAGAGGTCACACACACACGCATATAAAAGCAGAGAGCACATCAAGGTCTATATGGTAATGTTTGGTTTCTTCACTGATGCTCTTTCGGCTTTCAATAACCAAAGTTTGTGATGTTTGATATGCTAACGAGCTGTGTGATGAGACAGAGAATGCTAGCATTACACACACAAACAAGATCACAGATTGCCTCTGAGCATGTCTAGATCTCTAAGAAGGTGTTTGTGGTATGGAATGCATGCAACATACCTTATTGTTTGTGACTGATATTAGAGGGGAAACCCTGAAATATATATATAAAAAAAAAAAAAAAACAATTCTCCACAGGATAGGAGAAACGTAAGACATTACATAATAATTTTATATGAGTAGGTAAATCCAACCAATTTGATTAAAAAATGAATCCATCTGTGCTATTACACAATAGTGAGTTAAACATGTTTAACCCTCTGGTGCTCTTTGGTCAAAAAAAAAATTTAGATTTTAATTTGTAGATTTTAACTTCATTCCTTTCACGCAGTTTCTGCTGGTTTAAAAGGCATAGAAGGGGACAATTAAAGGAAATGTATAACACTATGAAACTGCTGGCACTTCATGAATGGCTCATGGGTCCAGATGGCAAAAGTCCTTCAGTCCATGTCCACATCCAGATCCAGCTCGGTGCTCAGATTGAGGTAGAAGAATGCATAGACTCCTAGCAGGAAGACCAGAACAGCCACAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264042 True 1253 lncRNA 0.39 2 6628293 6629575

Neighbor

gene id symbol gene type direction distance location
CI01000054_06437628_06441214 NA coding upstream 186812 6437628 ~ 6441481 (+)
CI01000054_06434217_06435680 OTUD6B coding upstream 192613 6433756 ~ 6435680 (+)
CI01000054_06411594_06411984 NA coding upstream 215772 6411594 ~ 6412521 (+)
CI01000054_06305908_06312122 NA coding upstream 316130 6305908 ~ 6312163 (+)
CI01000054_06292147_06297237 NA coding upstream 330733 6291976 ~ 6297560 (+)
CI01000054_06756071_06757443 NA coding downstream 126234 6755809 ~ 6757514 (+)
CI01000054_06759472_06761310 NA coding downstream 129236 6758811 ~ 6761310 (+)
CI01000054_06789505_06789810 NA coding downstream 158787 6788362 ~ 6789946 (+)
CI01000054_06795526_06796596 TRIB1 coding downstream 165951 6795526 ~ 6796644 (+)
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding downstream 235806 6865381 ~ 6869942 (+)
G232762 NA non-coding upstream 2067 6625914 ~ 6626226 (+)
G232761 NA non-coding upstream 2608 6625383 ~ 6625685 (+)
G232760 NA non-coding upstream 3228 6624836 ~ 6625065 (+)
G232758 NA non-coding upstream 5076 6622915 ~ 6623217 (+)
G232756 NA non-coding upstream 6670 6621387 ~ 6621623 (+)
G232788 NA non-coding downstream 49363 6678938 ~ 6679176 (+)
G232792 NA non-coding downstream 56631 6686206 ~ 6686781 (+)
G232794 NA non-coding downstream 79050 6708625 ~ 6708970 (+)
G232800 NA non-coding downstream 95267 6724842 ~ 6725148 (+)
G232805 NA non-coding downstream 105488 6735063 ~ 6735372 (+)
G232659 NA other upstream 252399 6374850 ~ 6375894 (+)
G232558 NA other upstream 586430 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1003618 5608457 ~ 5634804 (+)
G231863 NA other upstream 2177563 4407152 ~ 4450730 (+)
G232870 NA other downstream 258337 6887912 ~ 6888503 (+)
G233024 NA other downstream 937948 7567523 ~ 7609893 (+)
G233306 NA other downstream 1675024 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1676362 8325126 ~ 8329716 (+)
G235560 NA other downstream 3758561 10388136 ~ 10392378 (+)

Expression


Co-expression Network