G232792


Basic Information

Item Value
gene id G232792
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6686206 ~ 6686781 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264162
AATTAAGTGATGATTGAGCATTAGTGATGAACACCTGCTGTTAACAAGCAGAATCACTGAAGAAAAGAGAAACACAAGAACTACAACTGACTTCAGTCACAGCCTTAGATGAAATCAACTGAAGATAAAAATCGTGAAATCTCTGAAGATCTGATTAAACAACTCCACAAACAGCATTACCAGCTTCACTTATTACTAACCAGATTGACTTTATTTTCACACATCTACAGAATTGTTTTATTGGTTAAGAAAAAGAAAAGCAAAGAAAAGCAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAACAAAGTCACCATCAGGGAGATCAGCGTTTGCTTAAGTTGGTCTCTTGACCCTTGACTTTCTATGTTAGATATTTATCTGTAACGATGTATATGTTGTTGTAAAGCAGTGAGGTCAGTGCTTTACAGTGAGCAGATATTAGCTGTTGTTATATGATGATATAGTCATTGTGAGCTTGCCTGATTGCATCCAAAGCAACTGATCATATGTTTTGTTGTTTATACATTTTGGTTTTGCATTACGGTGGCATTTGTTTAATGCAATTTTGCAATAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264162 True 576 lncRNA 0.34 1 6686206 6686781

Neighbor

gene id symbol gene type direction distance location
CI01000054_06437628_06441214 NA coding upstream 244725 6437628 ~ 6441481 (+)
CI01000054_06434217_06435680 OTUD6B coding upstream 250526 6433756 ~ 6435680 (+)
CI01000054_06411594_06411984 NA coding upstream 273685 6411594 ~ 6412521 (+)
CI01000054_06305908_06312122 NA coding upstream 374043 6305908 ~ 6312163 (+)
CI01000054_06292147_06297237 NA coding upstream 388646 6291976 ~ 6297560 (+)
CI01000054_06756071_06757443 NA coding downstream 69028 6755809 ~ 6757514 (+)
CI01000054_06759472_06761310 NA coding downstream 72030 6758811 ~ 6761310 (+)
CI01000054_06789505_06789810 NA coding downstream 101581 6788362 ~ 6789946 (+)
CI01000054_06795526_06796596 TRIB1 coding downstream 108745 6795526 ~ 6796644 (+)
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding downstream 178600 6865381 ~ 6869942 (+)
G232788 NA non-coding upstream 7030 6678938 ~ 6679176 (+)
G232694 NA non-coding upstream 56631 6628293 ~ 6629575 (+)
G232762 NA non-coding upstream 59980 6625914 ~ 6626226 (+)
G232761 NA non-coding upstream 60521 6625383 ~ 6625685 (+)
G232760 NA non-coding upstream 61141 6624836 ~ 6625065 (+)
G232794 NA non-coding downstream 21844 6708625 ~ 6708970 (+)
G232800 NA non-coding downstream 38061 6724842 ~ 6725148 (+)
G232805 NA non-coding downstream 48282 6735063 ~ 6735372 (+)
G232827 NA non-coding downstream 98670 6785451 ~ 6831962 (+)
G232842 NA non-coding downstream 152844 6839625 ~ 6841063 (+)
G232659 NA other upstream 310312 6374850 ~ 6375894 (+)
G232558 NA other upstream 644343 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1061531 5608457 ~ 5634804 (+)
G231863 NA other upstream 2235476 4407152 ~ 4450730 (+)
G232870 NA other downstream 201131 6887912 ~ 6888503 (+)
G233024 NA other downstream 880742 7567523 ~ 7609893 (+)
G233306 NA other downstream 1617818 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1619156 8325126 ~ 8329716 (+)
G235560 NA other downstream 3701355 10388136 ~ 10392378 (+)

Expression


Co-expression Network