G232800


Basic Information

Item Value
gene id G232800
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6724842 ~ 6725148 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264170
GTGCTTTCTTCTATTGTTCATATATAGTGGCTCATGTTTGGCACTTGTAAGTCATTGCATTCAAAACAAAATAACACAACAAGTGGCATTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTCATGTCGTTCCACACCCGTAAGACATTCATTCATCTTCAGAACACAAATTAAGATATTTTTGATGAAATCCGAGAGCTCTCTGACTTCTTCATAGAAAGCAATTTAACCACCACTTTCAAGGTCCAGAAAGGTACTAAAGACATCGTTAAAATAGTCATCGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264170 True 307 lncRNA 0.36 1 6724842 6725148

Neighbor

gene id symbol gene type direction distance location
CI01000054_06437628_06441214 NA coding upstream 283361 6437628 ~ 6441481 (+)
CI01000054_06434217_06435680 OTUD6B coding upstream 289162 6433756 ~ 6435680 (+)
CI01000054_06411594_06411984 NA coding upstream 312321 6411594 ~ 6412521 (+)
CI01000054_06305908_06312122 NA coding upstream 412679 6305908 ~ 6312163 (+)
CI01000054_06292147_06297237 NA coding upstream 427282 6291976 ~ 6297560 (+)
CI01000054_06756071_06757443 NA coding downstream 30661 6755809 ~ 6757514 (+)
CI01000054_06759472_06761310 NA coding downstream 33663 6758811 ~ 6761310 (+)
CI01000054_06789505_06789810 NA coding downstream 63214 6788362 ~ 6789946 (+)
CI01000054_06795526_06796596 TRIB1 coding downstream 70378 6795526 ~ 6796644 (+)
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding downstream 140233 6865381 ~ 6869942 (+)
G232794 NA non-coding upstream 15872 6708625 ~ 6708970 (+)
G232792 NA non-coding upstream 38061 6686206 ~ 6686781 (+)
G232788 NA non-coding upstream 45666 6678938 ~ 6679176 (+)
G232694 NA non-coding upstream 95267 6628293 ~ 6629575 (+)
G232762 NA non-coding upstream 98616 6625914 ~ 6626226 (+)
G232805 NA non-coding downstream 9915 6735063 ~ 6735372 (+)
G232827 NA non-coding downstream 60303 6785451 ~ 6831962 (+)
G232842 NA non-coding downstream 114477 6839625 ~ 6841063 (+)
G232871 NA non-coding downstream 164773 6889921 ~ 6890149 (+)
G232876 NA non-coding downstream 190798 6915946 ~ 6917280 (+)
G232659 NA other upstream 348948 6374850 ~ 6375894 (+)
G232558 NA other upstream 682979 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1100167 5608457 ~ 5634804 (+)
G231863 NA other upstream 2274112 4407152 ~ 4450730 (+)
G232870 NA other downstream 162764 6887912 ~ 6888503 (+)
G233024 NA other downstream 842375 7567523 ~ 7609893 (+)
G233306 NA other downstream 1579451 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1580789 8325126 ~ 8329716 (+)
G235560 NA other downstream 3662988 10388136 ~ 10392378 (+)

Expression


Co-expression Network