Gene
RNA
| Item | Value |
|---|---|
| gene id | G232842 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 6839625 ~ 6841063 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU264232 | True | 651 | lncRNA | 0.47 | 5 | 6839625 | 6841063 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_06795526_06796596 | TRIB1 | coding | upstream | 42981 | 6795526 ~ 6796644 (+) |
| CI01000054_06789505_06789810 | NA | coding | upstream | 49679 | 6788362 ~ 6789946 (+) |
| CI01000054_06759472_06761310 | NA | coding | upstream | 78315 | 6758811 ~ 6761310 (+) |
| CI01000054_06756071_06757443 | NA | coding | upstream | 82111 | 6755809 ~ 6757514 (+) |
| CI01000054_06437628_06441214 | NA | coding | upstream | 398144 | 6437628 ~ 6441481 (+) |
| CI01000054_06865381_06869404 | KLHL38A, KLHL38 | coding | downstream | 24318 | 6865381 ~ 6869942 (+) |
| CI01000054_06962442_06966056 | AZIN1B | coding | downstream | 121270 | 6962333 ~ 6966238 (+) |
| CI01000054_06967494_06972758 | RRM2B | coding | downstream | 125951 | 6967014 ~ 6972876 (+) |
| CI01000054_06974533_06985526 | MTDHA | coding | downstream | 132289 | 6973352 ~ 6987037 (+) |
| CI01000054_06990478_06999311 | LAPTM4B | coding | downstream | 149342 | 6990405 ~ 6999311 (+) |
| G232827 | NA | non-coding | upstream | 7663 | 6785451 ~ 6831962 (+) |
| G232805 | NA | non-coding | upstream | 104253 | 6735063 ~ 6735372 (+) |
| G232800 | NA | non-coding | upstream | 114477 | 6724842 ~ 6725148 (+) |
| G232794 | NA | non-coding | upstream | 130655 | 6708625 ~ 6708970 (+) |
| G232792 | NA | non-coding | upstream | 152844 | 6686206 ~ 6686781 (+) |
| G232871 | NA | non-coding | downstream | 48858 | 6889921 ~ 6890149 (+) |
| G232876 | NA | non-coding | downstream | 74883 | 6915946 ~ 6917280 (+) |
| G232882 | NA | non-coding | downstream | 103493 | 6944556 ~ 6945596 (+) |
| G232883 | NA | non-coding | downstream | 104567 | 6945630 ~ 6945833 (+) |
| G232886 | NA | non-coding | downstream | 162548 | 7003611 ~ 7003974 (+) |
| G232659 | NA | other | upstream | 463731 | 6374850 ~ 6375894 (+) |
| CI01000054_06305908_06312122 | NA | other | upstream | 532765 | 6305908 ~ 6312163 (+) |
| G232558 | NA | other | upstream | 797762 | 5993660 ~ 6041863 (+) |
| CI01000054_05608892_05634793 | RNF19B | other | upstream | 1214950 | 5608457 ~ 5634804 (+) |
| G231863 | NA | other | upstream | 2388895 | 4407152 ~ 4450730 (+) |
| G232870 | NA | other | downstream | 46849 | 6887912 ~ 6888503 (+) |
| G233024 | NA | other | downstream | 726460 | 7567523 ~ 7609893 (+) |
| G233306 | NA | other | downstream | 1463536 | 8304599 ~ 8304949 (+) |
| CI01000054_08325126_08329621 | HPCAL4, VSNL1, VSNL1.S | other | downstream | 1464874 | 8325126 ~ 8329716 (+) |
| G235560 | NA | other | downstream | 3547073 | 10388136 ~ 10392378 (+) |
