G232870


Basic Information

Item Value
gene id G232870
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6887912 ~ 6888503 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264264
TAACAGAATACCAGACCTAACAGTTAAGACAGATTGCGGCGTGTTTTTTGTTTTCCGTGTCAGTGTTTTTCGTGTTGCACTTTTCGTTACCGTCACGATGTACACACCCGCATTTCTGTTGCTCTGCCTTGAGCAGAAGGACCGCTCCCTCAAGGAACATTTGGACAATTTTTTGCTTCTCGCATCATTGACACATTACCTGGACAGCAGCCTTTGCAACTTTCTGTTTGCTGGCCTGAACACCGCCACCAAAGCGCTGCTGTCCGGGGAAGGACCTCGAGGGAGCTTCTCCAAATATGTGGAGTGGGTACTGGCGTCATGTGGATCGTCAATGACCGTGGATTTCTGCGACAACGACGCCAGTTCCACTCCCACTCCAGTGCCCAGCCAGGAACCCTCAGACGGCGTGGAAAGGCAGCGCGACCTCACCAAAGACAGAGAGCCCACCTCCACCGCGATGCAGGAGCCAGCGACCAGCAGAACGACTGAGCTTAACATCGGCACGGAGACGGAGCCCAGCTGTCTGACCAGGTGTGTGAGTTTGCTGTTACCACCGCCGAGGGAGACAGTGTGGAAGACGAGGGGTTGGAAG
>TU264265
GACAGCAGCCTTTGCAACTTTCTGTTTGCTGGCCTGAACACCGCCACCAAAGCGCTGCTGTCCGGGGAAGGACCTCGAGGGAGCTTCTCCAAATATGTGGAGTGGGTACTGGCGTCATGTGGATCGTCAATGACCGTGGATTTCTGCGACAACGACGCCAGTTCCACTCCCACTCCAGTGCCCAGCCAGGAACCCTCAGACGGCGTGGAAAGGCAGCGCGACCTCACCAAAGACAGAGAGCCCACCTCCACCGCGATGCAGGAGCCAGCGACCAGCAGAACGACTGAGCTTAACATCGGCACGGAGACGGAGCCCAGCTGTCTGACCAGGTGTGTGAGTTTGCTGTTACCACCGCCGAGGGAGACAGTGTGGAAGACGAGGGGTTGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264264 False 592 TUCP 0.54 1 6887912 6888503
TU264265 True 390 TUCP 0.59 1 6888114 6888503

Neighbor

gene id symbol gene type direction distance location
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding upstream 17970 6865381 ~ 6869942 (+)
CI01000054_06795526_06796596 TRIB1 coding upstream 91268 6795526 ~ 6796644 (+)
CI01000054_06789505_06789810 NA coding upstream 97966 6788362 ~ 6789946 (+)
CI01000054_06759472_06761310 NA coding upstream 126602 6758811 ~ 6761310 (+)
CI01000054_06756071_06757443 NA coding upstream 130398 6755809 ~ 6757514 (+)
CI01000054_06962442_06966056 AZIN1B coding downstream 73830 6962333 ~ 6966238 (+)
CI01000054_06967494_06972758 RRM2B coding downstream 78511 6967014 ~ 6972876 (+)
CI01000054_06974533_06985526 MTDHA coding downstream 84849 6973352 ~ 6987037 (+)
CI01000054_06990478_06999311 LAPTM4B coding downstream 101902 6990405 ~ 6999311 (+)
CI01000054_07011099_07011947 NA coding downstream 122520 7011023 ~ 7012098 (+)
G232842 NA non-coding upstream 46849 6839625 ~ 6841063 (+)
G232827 NA non-coding upstream 55950 6785451 ~ 6831962 (+)
G232805 NA non-coding upstream 152540 6735063 ~ 6735372 (+)
G232800 NA non-coding upstream 162764 6724842 ~ 6725148 (+)
G232794 NA non-coding upstream 178942 6708625 ~ 6708970 (+)
G232871 NA non-coding downstream 1418 6889921 ~ 6890149 (+)
G232876 NA non-coding downstream 27443 6915946 ~ 6917280 (+)
G232882 NA non-coding downstream 56053 6944556 ~ 6945596 (+)
G232883 NA non-coding downstream 57127 6945630 ~ 6945833 (+)
G232886 NA non-coding downstream 115108 7003611 ~ 7003974 (+)
G232659 NA other upstream 512018 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 581052 6305908 ~ 6312163 (+)
G232558 NA other upstream 846049 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1263237 5608457 ~ 5634804 (+)
G231863 NA other upstream 2437182 4407152 ~ 4450730 (+)
G233024 NA other downstream 679020 7567523 ~ 7609893 (+)
G233306 NA other downstream 1416096 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1417434 8325126 ~ 8329716 (+)
G235560 NA other downstream 3499633 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 4676473 11564820 ~ 11568999 (+)

Expression


Co-expression Network