G232886


Basic Information

Item Value
gene id G232886
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7003611 ~ 7003974 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264281
TGCGTCTCTTGTGTCTCATTCAAAACAATAGGAGTGACGCGTCTTGTGTTATTCTATAGTCTCTGGTAGTAGTAGCAAAGACTAATACAAGACGGGTCACTCGTATTGTTTTGAATGGGAGAAAGTGCAACGCGCAATATGGCAGAATAAGTCCCGCCTTCTAAATAAGAGCCAATCGCCGATTGGTAAAGTCATCGCGTCACTGCAGCGGCCGTTAGAAGCTCCGGTTCCTATAGAAACAGTCAGACACGCGCCTCCGAAATGAGACACAAGAGGACTGTGCATGCGCATTAGCTTGATCCAGCCAGAAAAATACACTTTTTTTCAACCTCACCGCTAGATGCCGCTAAAATGTACACATTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264281 True 364 lncRNA 0.46 1 7003611 7003974

Neighbor

gene id symbol gene type direction distance location
CI01000054_06990478_06999311 LAPTM4B coding upstream 4300 6990405 ~ 6999311 (+)
CI01000054_06974533_06985526 MTDHA coding upstream 16574 6973352 ~ 6987037 (+)
CI01000054_06967494_06972758 RRM2B coding upstream 30735 6967014 ~ 6972876 (+)
CI01000054_06962442_06966056 AZIN1B coding upstream 37373 6962333 ~ 6966238 (+)
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding upstream 133669 6865381 ~ 6869942 (+)
CI01000054_07011099_07011947 NA coding downstream 7049 7011023 ~ 7012098 (+)
CI01000054_07019424_07021726 NA coding downstream 15450 7019424 ~ 7022311 (+)
CI01000054_07040367_07056299 5NT1A, NT5C1AA coding downstream 36393 7040367 ~ 7057570 (+)
CI01000054_07119711_07124720 HPCA.S, HPCAL1, HPCA, HPCAL1.L coding downstream 115737 7119711 ~ 7124770 (+)
CI01000054_07145831_07153505 NA coding downstream 141531 7145505 ~ 7154654 (+)
G232883 NA non-coding upstream 57778 6945630 ~ 6945833 (+)
G232882 NA non-coding upstream 58015 6944556 ~ 6945596 (+)
G232876 NA non-coding upstream 86331 6915946 ~ 6917280 (+)
G232871 NA non-coding upstream 113462 6889921 ~ 6890149 (+)
G232842 NA non-coding upstream 162548 6839625 ~ 6841063 (+)
G232848 NA non-coding downstream 3137 7007111 ~ 7009223 (+)
G232914 NA non-coding downstream 63440 7067414 ~ 7067653 (+)
G232942 NA non-coding downstream 172365 7176339 ~ 7176575 (+)
G232944 NA non-coding downstream 174274 7178248 ~ 7178633 (+)
G232948 NA non-coding downstream 177928 7181902 ~ 7182155 (+)
G232870 NA other upstream 115108 6887912 ~ 6888503 (+)
G232659 NA other upstream 627717 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 696751 6305908 ~ 6312163 (+)
G232558 NA other upstream 961748 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1378936 5608457 ~ 5634804 (+)
G233024 NA other downstream 563549 7567523 ~ 7609893 (+)
G233306 NA other downstream 1300625 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1301963 8325126 ~ 8329716 (+)
G235560 NA other downstream 3384162 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 4561002 11564820 ~ 11568999 (+)

Expression


Co-expression Network