G232942


Basic Information

Item Value
gene id G232942
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7176339 ~ 7176575 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264349
ATTTGACCGTCGCGGGAGGCTTATGGTTTGTCATGTCATGTGTGAGTCAAAACGAGTGTAAGAGATCCCTTTATCCCTCCATCCTCCCCCGACTCCATCTCCTTTCATTACCAATCCCTCTTTTATTCTGGTCTGGATCTCATTTCCAGAAAGCAAGAAGAAAGGAGCTCAAGAGAAAATCGGGCCTTTCGCCGTGTCTCTGCTGTTATTTTTGTTGTCCACCCGCTTCAAAGCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264349 True 237 lncRNA 0.47 1 7176339 7176575

Neighbor

gene id symbol gene type direction distance location
CI01000054_07145831_07153505 NA coding upstream 21685 7145505 ~ 7154654 (+)
CI01000054_07119711_07124720 HPCA.S, HPCAL1, HPCA, HPCAL1.L coding upstream 51569 7119711 ~ 7124770 (+)
CI01000054_07040367_07056299 5NT1A, NT5C1AA coding upstream 118769 7040367 ~ 7057570 (+)
CI01000054_07019424_07021726 NA coding upstream 154028 7019424 ~ 7022311 (+)
CI01000054_07011099_07011947 NA coding upstream 164241 7011023 ~ 7012098 (+)
CI01000054_07189617_07192052 ZBTB8B coding downstream 11402 7187977 ~ 7192069 (+)
CI01000054_07193147_07196114 FUCA1.1, FUCA1.2 coding downstream 16572 7193147 ~ 7196219 (+)
CI01000054_07198599_07202146 FUCA1.1, FUCA1.2 coding downstream 22024 7198599 ~ 7202293 (+)
CI01000054_07209423_07216395 GMPR coding downstream 32848 7209423 ~ 7217210 (+)
CI01000054_07240475_07241355 NA coding downstream 63848 7240423 ~ 7242458 (+)
G232914 NA non-coding upstream 108686 7067414 ~ 7067653 (+)
G232848 NA non-coding upstream 167116 7007111 ~ 7009223 (+)
G232886 NA non-coding upstream 172365 7003611 ~ 7003974 (+)
G232883 NA non-coding upstream 230506 6945630 ~ 6945833 (+)
G232882 NA non-coding upstream 230743 6944556 ~ 6945596 (+)
G232944 NA non-coding downstream 1673 7178248 ~ 7178633 (+)
G232948 NA non-coding downstream 5327 7181902 ~ 7182155 (+)
G232907 NA non-coding downstream 41564 7218139 ~ 7219649 (+)
G232904 NA non-coding downstream 123105 7299680 ~ 7330015 (+)
G233034 NA non-coding downstream 170228 7346803 ~ 7347003 (+)
G232870 NA other upstream 287836 6887912 ~ 6888503 (+)
G232659 NA other upstream 800445 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 869479 6305908 ~ 6312163 (+)
G232558 NA other upstream 1134476 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1551664 5608457 ~ 5634804 (+)
G233024 NA other downstream 390948 7567523 ~ 7609893 (+)
G233306 NA other downstream 1128024 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1129362 8325126 ~ 8329716 (+)
G235560 NA other downstream 3211561 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 4388401 11564820 ~ 11568999 (+)

Expression


Co-expression Network