G233896


Basic Information

Item Value
gene id G233896
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7177840 ~ 7178439 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU265386
GGAAAACAATCAGTCATATACCCTCAGAATAAATGATGAGAAGTATACGATGAGATCATTATGCCAGGCTAGCAAACAGTGTAACATATAATTACCTCAGATATCCAGCGCTAGTTTCAACAACATTGTCTAGCTTCCTTTGAAGTTGCAGTGAAAAAGACTAGGCGTTGTTTTTATTCCACTACATTGACTTTGTCAGCTTAATTCACTGTTAGATTAGATCGATTACACTAGCTATTCACTTGAAACATAGCATGCTGAGGACATCTGCTGGTTAAAGCCGTGTAAATGCAACAAGAACAGCAAAAACACGTTGTACACACTTTGAAACCGCAGCGCATTTTAGAATAAACAGACCGTTATCGTTCGGTGGTGTGGACGCAAATATAGCTATCGTTACAGTTATTTTTATTGTTCTTAGTGTGAACGGGCCTTTACACTGTAAGCTGATCAGCTATCTGTGTTTCAATATGCTTCTGCTTATAGAGTTTTTTCGATGGATGCTAGGTCGGTTAGAATCTGTGATCTCTTACCCAGTTCATTTGCTGGCTTCCATGGCTGCAATACTCTGTGTTTTCCACCAACTAGCAACCCGAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265386 True 600 lncRNA 0.40 1 7177840 7178439

Neighbor

gene id symbol gene type direction distance location
CI01000054_07165957_07169539 HEYL coding downstream 8301 7165435 ~ 7169539 (-)
CI01000054_07130499_07136946 NA coding downstream 40894 7130315 ~ 7136946 (-)
CI01000054_07080724_07095503 NA coding downstream 82167 7080352 ~ 7095673 (-)
CI01000054_07033076_07038297 STK3 coding downstream 139543 7031700 ~ 7038297 (-)
CI01000054_07026336_07030820 UK114, RIDA coding downstream 146331 7026147 ~ 7031509 (-)
CI01000054_07228008_07231489 ATXN1A, ATXN1 coding upstream 49155 7227594 ~ 7231489 (-)
CI01000054_07311700_07314853 NA coding upstream 133101 7311540 ~ 7317174 (-)
CI01000054_07368294_07372480 FAM8A1A coding upstream 189653 7368092 ~ 7373799 (-)
CI01000054_07385840_07388475 PMP2, FABP11A, FABPH coding upstream 207353 7385792 ~ 7389417 (-)
CI01000054_07390631_07391977 MRPL53 coding upstream 212147 7390586 ~ 7393103 (-)
G233881 NA non-coding downstream 37489 7140012 ~ 7140351 (-)
G233843 NA non-coding downstream 104670 7072826 ~ 7073170 (-)
G233822 NA non-coding downstream 128840 7040111 ~ 7049000 (-)
G233812 NA non-coding downstream 165863 7011064 ~ 7011977 (-)
G233627 NA non-coding downstream 214432 6960373 ~ 6963408 (-)
G233899 NA non-coding upstream 3330 7181769 ~ 7182120 (-)
G233907 NA non-coding upstream 14560 7192999 ~ 7198957 (-)
G233915 NA non-coding upstream 27469 7205908 ~ 7206180 (-)
G233904 NA non-coding upstream 41592 7220031 ~ 7226845 (-)
G233922 NA non-coding upstream 159465 7337904 ~ 7338116 (-)
CI01000054_06629482_06641861 TRIQK other downstream 523827 6628082 ~ 6642160 (-)
G232274 NA other downstream 1968600 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 2505607 4670151 ~ 4681361 (-)
G231645 NA other downstream 3195017 3981847 ~ 3982823 (-)
G235216 NA other upstream 2069600 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 2304708 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 2684882 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 3625432 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 3692665 10871104 ~ 10881495 (-)

Expression


Co-expression Network