Gene
RNA
| Item | Value |
|---|---|
| gene id | G232907 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 7218139 ~ 7219649 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU264313 | True | 1511 | lncRNA | 0.37 | 1 | 7218139 | 7219649 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_07209423_07216395 | GMPR | coding | upstream | 929 | 7209423 ~ 7217210 (+) |
| CI01000054_07198599_07202146 | FUCA1.1, FUCA1.2 | coding | upstream | 15846 | 7198599 ~ 7202293 (+) |
| CI01000054_07193147_07196114 | FUCA1.1, FUCA1.2 | coding | upstream | 21920 | 7193147 ~ 7196219 (+) |
| CI01000054_07189617_07192052 | ZBTB8B | coding | upstream | 26070 | 7187977 ~ 7192069 (+) |
| CI01000054_07145831_07153505 | NA | coding | upstream | 63485 | 7145505 ~ 7154654 (+) |
| CI01000054_07240475_07241355 | NA | coding | downstream | 20774 | 7240423 ~ 7242458 (+) |
| CI01000054_07252016_07252204 | NA | coding | downstream | 32152 | 7251801 ~ 7252417 (+) |
| CI01000054_07271120_07280248 | NA | coding | downstream | 51257 | 7270906 ~ 7280365 (+) |
| CI01000054_07438245_07449632 | PAG1 | coding | downstream | 217783 | 7437432 ~ 7449712 (+) |
| CI01000054_07454627_07503082 | ZNF704 | coding | downstream | 234978 | 7454627 ~ 7503082 (+) |
| G232948 | NA | non-coding | upstream | 35984 | 7181902 ~ 7182155 (+) |
| G232944 | NA | non-coding | upstream | 39506 | 7178248 ~ 7178633 (+) |
| G232942 | NA | non-coding | upstream | 41564 | 7176339 ~ 7176575 (+) |
| G232914 | NA | non-coding | upstream | 150486 | 7067414 ~ 7067653 (+) |
| G232848 | NA | non-coding | upstream | 208916 | 7007111 ~ 7009223 (+) |
| G232904 | NA | non-coding | downstream | 80031 | 7299680 ~ 7330015 (+) |
| G233034 | NA | non-coding | downstream | 127154 | 7346803 ~ 7347003 (+) |
| G233010 | NA | non-coding | downstream | 142554 | 7362203 ~ 7387184 (+) |
| G233050 | NA | non-coding | downstream | 169495 | 7389144 ~ 7389348 (+) |
| G233051 | NA | non-coding | downstream | 169713 | 7389362 ~ 7389577 (+) |
| G232870 | NA | other | upstream | 329636 | 6887912 ~ 6888503 (+) |
| G232659 | NA | other | upstream | 842245 | 6374850 ~ 6375894 (+) |
| CI01000054_06305908_06312122 | NA | other | upstream | 911279 | 6305908 ~ 6312163 (+) |
| G232558 | NA | other | upstream | 1176276 | 5993660 ~ 6041863 (+) |
| CI01000054_05608892_05634793 | RNF19B | other | upstream | 1593464 | 5608457 ~ 5634804 (+) |
| G233024 | NA | other | downstream | 347874 | 7567523 ~ 7609893 (+) |
| G233306 | NA | other | downstream | 1084950 | 8304599 ~ 8304949 (+) |
| CI01000054_08325126_08329621 | HPCAL4, VSNL1, VSNL1.S | other | downstream | 1086288 | 8325126 ~ 8329716 (+) |
| G235560 | NA | other | downstream | 3168487 | 10388136 ~ 10392378 (+) |
| CI01000054_11564820_11568338 | S100V2 | other | downstream | 4345327 | 11564820 ~ 11568999 (+) |
