Gene
RNA
| Item | Value |
|---|---|
| gene id | G233942 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 7508368 ~ 7509658 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU265438 | True | 1291 | lncRNA | 0.38 | 1 | 7508368 | 7509658 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_07418471_07418846 | NA | coding | downstream | 89515 | 7418167 ~ 7418853 (-) |
| CI01000054_07398765_07399272 | NA | coding | downstream | 108314 | 7398554 ~ 7400054 (-) |
| CI01000054_07390631_07391977 | MRPL53 | coding | downstream | 115265 | 7390586 ~ 7393103 (-) |
| CI01000054_07385840_07388475 | PMP2, FABP11A, FABPH | coding | downstream | 118951 | 7385792 ~ 7389417 (-) |
| CI01000054_07368294_07372480 | FAM8A1A | coding | downstream | 134569 | 7368092 ~ 7373799 (-) |
| CI01000054_07516390_07526784 | TPD52 | coding | upstream | 6509 | 7516167 ~ 7527449 (-) |
| CI01000054_07607425_07611037 | STMN2A, STMN2B, STMN2 | coding | upstream | 96842 | 7606500 ~ 7611037 (-) |
| CI01000054_07642350_07658894 | NA | coding | upstream | 132142 | 7641800 ~ 7660515 (-) |
| CI01000054_07712126_07718933 | GMNN | coding | upstream | 202377 | 7712035 ~ 7718933 (-) |
| CI01000054_07723457_07725732 | ACOT13 | coding | upstream | 213750 | 7723408 ~ 7725732 (-) |
| G233922 | NA | non-coding | downstream | 170252 | 7337904 ~ 7338116 (-) |
| G233904 | NA | non-coding | downstream | 281523 | 7220031 ~ 7226845 (-) |
| G233915 | NA | non-coding | downstream | 302188 | 7205908 ~ 7206180 (-) |
| G233907 | NA | non-coding | downstream | 309411 | 7192999 ~ 7198957 (-) |
| G233899 | NA | non-coding | downstream | 326248 | 7181769 ~ 7182120 (-) |
| G234023 | NA | non-coding | upstream | 56581 | 7566239 ~ 7566525 (-) |
| G234024 | NA | non-coding | upstream | 57298 | 7566956 ~ 7567186 (-) |
| G234025 | NA | non-coding | upstream | 57576 | 7567234 ~ 7567509 (-) |
| G234042 | NA | non-coding | upstream | 119919 | 7629577 ~ 7630828 (-) |
| G234039 | NA | non-coding | upstream | 123344 | 7633002 ~ 7634751 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 336695 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 854355 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 2299128 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 2836135 | 4670151 ~ 4681361 (-) |
| G231645 | NA | other | downstream | 3525545 | 3981847 ~ 3982823 (-) |
| G235216 | NA | other | upstream | 1738381 | 9248039 ~ 9248538 (-) |
| CI01000054_09483912_09484282 | MRPL36 | other | upstream | 1973489 | 9483147 ~ 9484282 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 2353663 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 3294213 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 3361446 | 10871104 ~ 10881495 (-) |
