G233024


Basic Information

Item Value
gene id G233024
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7567523 ~ 7609893 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU264435
TTTTTTTTTTTTTTTTTTTTTTTTTTTATTATCATTCCAAGAAACCCAAGCCTTTATTCACCACAGCTTGCTTCCAAAGTTACATGTGTGAAGGGAATAAAACACACAGCTGGAAGAGAAAGATGAAAGTGGGCAGGTTTGTGACATTAAAGCTACTTACACAATAGCTATGGCACATTATAACACCGTCTACCCACACTGCTCTTGACACACACACACACACTTACACACACACCATCTTGCAATGTCCATTTTATTACCAGATATTGACCTCCAAAAACCTGAAAATCAACAATTAGAATTGGAGAACTTCAGTACACGTGATTCTCAAGAACTCAAGGTTAACTTGATGTTATGCTGTGAGCATAAATGCAACCCAGACTATGGTCAAACACAGGTCAAGAGACGTCACATGACTTCGGCGTGGCACAAACAGCAGTTCCTCTTGGGCAACATGACATTTTTTACTAAATCATGCTGACCAGGGGCATATAAGTATGTGTGTGTGTGTGTGTGTGTCTGTGTGTTGTGACTATATACCAGATGAATGTATGAAGAAAGAGCTAGAGATTGTTGTAAATGCTATGTTAGTGACCGGTTAGAGCTGTGTGTACTGTAGTGTGGCGGCTTTTACTCTCTTCACATGGACATAGAGACACTAACATGATCATTGCGTTTAGAGAAGACATTGCAAATGTCAGCTAGCCAGCAAACTCACAAACACCAAAGCCTGGTACAAGAGAAACTGTAGCAGATCTGAGAGAGAGAGAGGGAGGAAACAAGTACATCCACTAAAAGATAAAGATACAGAGAGAGAAACTTATAAAATGGCACACCGCAATACTTTTCATCATCTCATATAAAACAAATAGGAAGTATTTACAAAAAAAACCACACCCACTTTGACTGGTTTCAAATTGATCAAAAACATTTTTTTTTCTTGATTAATGGTGTTCCTTTTCTCTTATGGACTATATCGGGCAGGATGCTGTTGGTGAGGGGGGCAGGGTCGATTCTTTTGGCCTGGGCGGGGCGGGGCAGGGGGGTGGTGCGCCAGAGGCTCTTTTCTACTCAGGGCTGCGGTGGCAGGGTGAGAGGGGGTCTCTCTGGGGACGGGAGGTCGCAGGTATGGGGAGAGGGGGTGGGGTGATGGGACGGTGGGTGTACAGAGATGTGCTCATGCTGTCAGCTCTTCCCTCAGCTCTTTGTTTCTGCGCACCACCTGAGCGTGCCTCTCCTTCTCCTCTGCCATCCTGCTGAAGTTGCTGTTCTCCTCCATGGCTTTCAGCAGGACGTCCCGCTCATGTTCACGTTTCTCAGCCAGGGCCCTCAGGATTTGAGCCTCCTGGGACTGGAGAGGAAGAGTGGGGCAGAGTGAAATGAAATAGGTGTATATAAAATAAATATAAAATAATAGGAATAAAATAATAGAAATAAAATGGCAATGACAGATATACAGTATAGTACAGATATATTATACAAATAAGTGGGTCACTTACTCTCCTCCTGTCCTCTGCAGCCTCCAGCTTCTTCTGGATGTCCTCCAGAGACATGTCCCTCTTTTTAGGAGGTGAAGTGATGCTGTAGCCCCCATCAGCCGTGGGAGAAGGTGGCTTCAGGATGACCTCAAAGGCCTGGCCAGAAGCCCGCTTGTTAATGGGCTTAACCTCCATGTCTGAGCCTTCAAACTCGCCCATGAGGTTTTTGCGTGCCTCTGGGTAGAGACAGGAGCAGATGAGGGAGACAAGGGAGAGCTCCTTCATCTTCTCTTTGTATGCTGCAGAGAGACACATCAAACAAAAGTATTGACCCAGATTTTCTCTAGCTGTTTTATGAATGATTATTCGAAACTGCATCACTAATGTTGCAGAAAATAACCCAAGTCATCTAGGTTTTGAATCAGAGGTGCACTGACTGATATAAAATATACATATTAACAGAATAAATAGTTAAAATATGTAGATCAGTAGATATGTAGAATCATCTATCTATCTATCTATATACAGAAATGTATATATTGTGTGTAAAAATGTTAAATATAAAAGAAAAGAAATTGTATATACAATTTTATTATTATAATAAGTTAATTGGTAACACTTTCCAATAAGGTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264435 True 2114 TUCP 0.42 4 7567523 7609893

Neighbor

gene id symbol gene type direction distance location
CI01000054_07539134_07556858 ZBTB10 coding upstream 9128 7539134 ~ 7558395 (+)
CI01000054_07454627_07503082 ZNF704 coding upstream 64441 7454627 ~ 7503082 (+)
CI01000054_07438245_07449632 PAG1 coding upstream 117811 7437432 ~ 7449712 (+)
CI01000054_07271120_07280248 NA coding upstream 287158 7270906 ~ 7280365 (+)
CI01000054_07252016_07252204 NA coding upstream 315106 7251801 ~ 7252417 (+)
CI01000054_07620269_07633084 NA coding downstream 8844 7618737 ~ 7633111 (+)
CI01000054_07675827_07711906 FAM65B coding downstream 65934 7675827 ~ 7711982 (+)
CI01000054_07719547_07722201 C11H6ORF62, CUNH6ORF62, C3H6ORF62, CLG10H6ORF62, C12H6ORF62, C23H6ORF62, C6H6ORF62, C18H6ORF62, CLG22H6ORF62, C6ORF62, CSGR19H6ORF62, C4H6ORF62, C24H6ORF62, C2H6ORF62, CLG11H6ORF62, C16H6ORF62, BC005537 coding downstream 109604 7719497 ~ 7722271 (+)
CI01000054_07726558_07730944 TDP2B, TDP2 coding downstream 116665 7726558 ~ 7731011 (+)
CI01000054_07755766_07787767 NA coding downstream 145873 7755766 ~ 7788110 (+)
G233018 NA non-coding upstream 50917 7514404 ~ 7516606 (+)
G233017 NA non-coding upstream 53823 7508766 ~ 7513700 (+)
G233065 NA non-coding upstream 146166 7420428 ~ 7421357 (+)
G233053 NA non-coding upstream 176629 7390578 ~ 7390894 (+)
G233051 NA non-coding upstream 177946 7389362 ~ 7389577 (+)
G233096 NA non-coding downstream 121962 7731855 ~ 7732104 (+)
G233025 NA non-coding downstream 124928 7734821 ~ 7736502 (+)
G233030 NA non-coding downstream 176184 7786077 ~ 7812277 (+)
G233026 NA non-coding downstream 181137 7791030 ~ 7793543 (+)
G233123 NA non-coding downstream 219377 7829270 ~ 7829472 (+)
G232870 NA other upstream 679020 6887912 ~ 6888503 (+)
G232659 NA other upstream 1191629 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 1260663 6305908 ~ 6312163 (+)
G232558 NA other upstream 1525660 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1942848 5608457 ~ 5634804 (+)
G233306 NA other downstream 694706 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 696044 8325126 ~ 8329716 (+)
G235560 NA other downstream 2778243 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 3955083 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 4023083 11632959 ~ 11635103 (+)

Expression


Co-expression Network